RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 TGM6O95932 706 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 ACTL6AO96019 429 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 THBDP07204 575 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 SOD3P08294 240 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 NPIPA8P0DM63 369 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 CD247P20963 164 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 RFX3P48380 749 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 EXOC3L2Q2M3D2 409 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 DHRS4L2Q6PKH6 230 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 APOOLQ6UXV4 268 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 MEX3DQ86XN8 651 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 AQP12AQ8IXF9 295 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 PEX5LQ8IYB4 626 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 OR52P1PQ8NH57 321 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 SPPL2AQ8TCT8 520 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 WDR60Q8WVS4 1066 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 TMCO6Q96DC7 493 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 NSMCE2Q96MF7 247 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 SPATA5L1Q9BVQ7 753 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 ABCG2Q9UNQ0 655 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 DTNAQ9Y4J8 743 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 MAGED1Q9Y5V3 778 aaPredicted RBP12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 OVOL3O00110 214 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 TP53I11O14683 189 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 KLF4O43474 513 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 SSX4O60224 188 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 TPST1O60507 370 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 CIB2O75838 187 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 SERPINA1P01009 418 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 IFNA14P01570 189 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 OPN1SWP03999 348 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 CPN1P15169 458 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 IGFBP5P24593 272 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PRKAR1BP31321 381 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PTGDSP41222 190 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 STARP49675 285 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 GAS1P54826 345 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 ACTR3P61158 418 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 SELENOWP63302 87 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PLAURQ03405 335 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 CCNIQ14094 377 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 FLOT2Q14254 428 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 FGFBP1Q14512 234 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 DUSP7Q16829 419 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PDLIM3Q53GG5 364 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 CYBRD1Q53TN4 286 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PDZK1Q5T2W1 519 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 RNF220Q5VTB9 566 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 EEF1A1P5Q5VTE0 462 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 HMGN2P46Q86SG4 172 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 ADGRE4PQ86SQ3 457 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 VRK2Q86Y07 508 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 GPR32P1Q8NGA4 272 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 RASSF5Q8WWW0 418 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 POP5Q969H6 163 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 FAM162AQ96A26 154 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PINK1Q9BXM7 581 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 RTN4RQ9BZR6 473 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 ELOVL5Q9NYP7 299 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 RPS6KA6Q9UK32 745 aa12.39□□□□□ -0.43
SHKBP1-218ENST00000598907 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 DYSFO75923 2080 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 TCRBV3S1A0A5B6 114 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ANKRD33BA6NCL7 494 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 CLOCKO15516 846 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 IL7RP16871 459 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 EGR1P18146 543 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 TCEA1P23193 301 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 EVI2BP34910 448 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 CASP3P42574 277 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 KCNJ10P78508 379 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 SNTA1Q13424 505 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZSWIM7Q19AV6 140 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 GLIPR1L2Q4G1C9 344 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 LIN52Q52LA3 116 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF311Q5JNZ3 666 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 C1orf146Q5VVC0 180 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF836Q6ZNA1 936 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 DNM1P46Q6ZS02 220 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 CMIPQ8IY22 773 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 CLIP4Q8N3C7 705 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF527Q8NB42 609 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 DUS3LQ96G46 650 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 TNFRSF13CQ96RJ3 184 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms