RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
UPF1-205ENST00000598209 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
UPF1-205ENST00000598209 IGKV3D-15A0A087WSY6 115 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 LIPT2A6NK58 231 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 ZNF724A8MTY0 619 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 C16orf97H3BN30 126 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 TPST2O60704 377 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 EIF1BO60739 113 aaKnown RBP12.31□□□□□ -0.44
UPF1-205ENST00000598209 RAMP1O60894 148 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 GPIP06744 558 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 PRDX6P30041 224 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 CCKARP32238 428 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 UGT2B10P36537 528 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 NUDT2P50583 147 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 CRYBA2P53672 197 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 H3F3AP84243 136 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 VEZF1Q14119 521 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 PDK3Q15120 406 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 OR1Q1Q15612 314 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 OR7A5Q15622 319 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 NRF1Q16656 503 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 ALG10BQ5I7T1 473 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 HACD2Q6Y1H2 254 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 BEND4Q6ZU67 534 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 PIGWQ7Z7B1 504 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 RANBP3LQ86VV4 465 aaPredicted RBP12.31□□□□□ -0.44
UPF1-205ENST00000598209 TMEM200AQ86VY9 491 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 OR2T12Q8NG77 320 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
UPF1-205ENST00000598209 RASSF5Q8WWW0 418 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 LURAP1Q96LR2 239 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 DACH2Q96NX9 599 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 HOPXQ9BPY8 73 aaPredicted RBP12.31□□□□□ -0.44
UPF1-205ENST00000598209 TAPBPLQ9BX59 468 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 KLHL4Q9C0H6 718 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 C12orf10Q9HB07 376 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 TMEM27Q9HBJ8 222 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 EMC3Q9P0I2 261 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 ARL2BPQ9Y2Y0 163 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 TESMINQ9Y4I5 508 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 FBN2P35556 2912 aa12.31□□□□□ -0.44
UPF1-205ENST00000598209 APCP25054 2843 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 A6NNC1 897 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 NPIPB7O75200 414 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 AHSA1O95433 338 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 PNMTP11086 282 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 OR3A2P47893 321 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 SLC16A1P53985 500 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 EGR4Q05215 589 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 DAZAP2Q15038 168 aaPredicted RBP12.3□□□□□ -0.44
UPF1-205ENST00000598209 FAM91A1Q658Y4 838 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
UPF1-205ENST00000598209 ULK3Q6PHR2 472 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 PAQR6Q6TCH4 344 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 STAC2Q6ZMT1 411 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 GALNT5Q7Z7M9 940 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 MICU2Q8IYU8 434 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 OR6T1Q8NGN1 323 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 VANGL1Q8TAA9 524 aaPredicted RBP12.3□□□□□ -0.44
UPF1-205ENST00000598209 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 MCHR1Q99705 422 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 ADPRHL2Q9NX46 363 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 SELENONQ9NZV5 590 aa12.3□□□□□ -0.44
UPF1-205ENST00000598209 GMPR2Q9P2T1 348 aaKnown RBP12.3□□□□□ -0.44
UPF1-205ENST00000598209 A0A0B4J2E0 115 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 A0A1B0GX12 115 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 ELOVL7A1L3X0 281 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 NME4O00746 187 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 GPR171O14626 319 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 FMO6PO60774 539 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 CTAG2O75638 210 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 AKR7A3O95154 331 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 IFNA14P01570 189 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 RPS5P46782 204 aaKnown RBP12.29□□□□□ -0.44
UPF1-205ENST00000598209 SLC7A2P52569 658 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 LIPEQ05469 1076 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 NPTX1Q15818 432 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 OTUD3Q5T2D3 398 aaPredicted RBP12.29□□□□□ -0.44
UPF1-205ENST00000598209 ANKRD34AQ69YU3 496 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.29□□□□□ -0.44
UPF1-205ENST00000598209 RBM45Q8IUH3 476 aaKnown RBP12.29□□□□□ -0.44
UPF1-205ENST00000598209 ZNF100Q8IYN0 542 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 TMEM99Q8N816 258 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 OR4D11Q8NGI4 311 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 PROX1Q92786 737 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 SLC38A4Q969I6 547 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 PRSS50Q9UI38 385 aa12.29□□□□□ -0.44
UPF1-205ENST00000598209 NOSIPQ9Y314 301 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms