RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TMEM72A0PK05 275 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 GPR171O14626 319 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 POLR3GO15318 223 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 RAMP1O60894 148 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 LYZL6O75951 148 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 THBS1P07996 1170 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 IMPDH2P12268 514 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 UQCRBP14927 111 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 HOXB9P17482 250 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 CCNA2P20248 432 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 IGHV1-2P23083 117 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 TNK1Q13470 666 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 RGNQ15493 299 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 TTMPQ5BVD1 217 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ADAM5Q6NVV9 412 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ZNF836Q6ZNA1 936 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 LSRQ86X29 649 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 VRK2Q86Y07 508 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 HIPK1Q86Z02 1210 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 CCDC103Q8IW40 242 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 DDIT4LQ96D03 193 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ESRP2Q9H6T0 727 aaKnown RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ZNF443Q9Y2A4 671 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 NOSIPQ9Y314 301 aaKnown RBP11.65□□□□□ -0.54
H3F3B-213ENST00000593254 RNF115Q9Y4L5 304 aa11.65□□□□□ -0.54
H3F3B-213ENST00000593254 ALPK2Q86TB3 2170 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 ZC3H12DA2A288 527 aaKnown RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 TMCC2O75069 709 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 PGM3O95394 542 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 BMP2P12643 396 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 NTF4P34130 210 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 ACAA2P42765 397 aaKnown RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 IDH3AP50213 366 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 OR2B6P58173 313 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 STX1BP61266 288 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 SLC35A1P78382 337 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 FADDQ13158 208 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 LARS2Q15031 903 aaKnown RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 RPS26P11Q5JNZ5 115 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 FBXW9Q5XUX1 488 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 FUNDC1Q8IVP5 155 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 ZNF433Q8N7K0 673 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 LILRB1Q8NHL6 650 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 AKAP1Q92667 903 aaKnown RBP eCLIP11.64□□□□□ -0.55
H3F3B-213ENST00000593254 APH1AQ96BI3 265 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 EBF4Q9BQW3 602 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 CCDC28BQ9BUN5 200 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 FAM53CQ9NYF3 392 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 MALT1Q9UDY8 824 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
H3F3B-213ENST00000593254 A0A096LPI6 279 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 CLIC1O00299 241 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 MRPL33O75394 65 aaKnown RBP11.63□□□□□ -0.55
H3F3B-213ENST00000593254 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 CD3EP07766 207 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 GGT1P19440 569 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 BSPH1Q075Z2 132 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 PPA1Q15181 289 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 STK11Q15831 433 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 LRIF1Q5T3J3 769 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 PRAMEF8Q5VWM4 474 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 PRAMEF7Q5VXH5 474 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 WBP2NLQ6ICG8 309 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 P2RY8Q86VZ1 359 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 CLIP4Q8N3C7 705 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 SPATA9Q9BWV2 254 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 RAD21L1Q9H4I0 556 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 CXorf56Q9H5V9 222 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 BCL2L10Q9HD36 194 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 A4GALTQ9NPC4 353 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 SLC52A3Q9NQ40 469 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 SLC25A37Q9NYZ2 338 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 FLVCR1Q9Y5Y0 555 aa11.63□□□□□ -0.55
H3F3B-213ENST00000593254 DPRXA6NFQ7 191 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 LIPT2A6NK58 231 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 RNF223E7ERA6 249 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms