RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CDK5Q00535 292 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 MYBPC1Q00872 1141 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 IL5RAQ01344 420 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 EGR4Q05215 589 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 CD47Q08722 323 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 KLRB1Q12918 225 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 TUBA3CQ13748 450 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 INPP5JQ15735 1006 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 PLPPR5Q32ZL2 321 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 AGAP7PQ5VUJ5 663 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 TUBA3EQ6PEY2 450 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 C5orf46Q6UWT4 87 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ARSKQ6UWY0 536 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ZNF620Q6ZNG0 422 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 CCDC71Q8IV32 467 aaPredicted RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 SLC43A2Q8N370 569 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 PSD4Q8NDX1 1056 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 TEX47Q8TBZ9 253 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 STK35Q8TDR2 534 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 TRUB1Q8WWH5 349 aaKnown RBP12.19□□□□□ -0.46
VMP1-217ENST00000593168 AGAP4Q96P64 663 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 RNF32Q9H0A6 362 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 ANKRD10Q9NXR5 420 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 HRH3Q9Y5N1 445 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 CDH10Q9Y6N8 788 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 MYO9AB2RTY4 2548 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 CPAMD8Q8IZJ3 1885 aa12.19□□□□□ -0.46
VMP1-217ENST00000593168 A8MVM7 634 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 ZNF208O43345 1280 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SUSD5O60279 629 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 MPZL2O60487 215 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 HCN1O60741 890 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 NPIPB7O75200 414 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SLC25A12O75746 678 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 CBR3O75828 277 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 NEURL1O76050 574 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 OR7A10O76100 309 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 TNFAIP8O95379 198 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SAGP10523 405 aaPredicted RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 FUT1P19526 365 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 PTNP21246 168 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 EIF1P41567 113 aaKnown RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 UQCRFS1P47985 274 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 MASP1P48740 699 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SMSP52788 366 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 TEKQ02763 1124 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 CDK5R2Q13319 367 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 MFAP5Q13361 173 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 GINS1Q14691 196 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 MAD2L1BPQ15013 274 aaPredicted RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 ANKDD1AQ495B1 522 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 ATCAYQ86WG3 371 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 P3H2Q8IVL5 708 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 OR1J4Q8NGS1 313 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 C1GALT1C1Q96EU7 318 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 EGLN3Q9H6Z9 239 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 ZNF552Q9H707 407 aaPredicted RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 GPR83Q9NYM4 423 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 PLEKHB1Q9UF11 243 aaPredicted RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 MYRFQ9Y2G1 1151 aa12.18□□□□□ -0.46
VMP1-217ENST00000593168 TNRC6AQ8NDV7 1962 aaKnown RBP12.18□□□□□ -0.46
VMP1-217ENST00000593168 TRAV36DV7A0A075B6V5 113 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 TMEM72A0PK05 275 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 WDPCPO95876 746 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 CH25HO95992 272 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 BMP7P18075 431 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 DSCR4P56555 118 aaPredicted RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 CXCR4P61073 352 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 FOXF1Q12946 379 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 TOP3AQ13472 1001 aaPredicted RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 OR1C1Q15619 314 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZNF74Q16587 644 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 CTU2Q2VPK5 515 aaKnown RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZBED5Q49AG3 693 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 RBM48Q5RL73 367 aaKnown RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 TMEM236Q5W0B7 351 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 OAFQ86UD1 273 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 ENTHD1Q8IYW4 607 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 OR13C2Q8NGS9 318 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 OR6S1Q8NH40 331 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 RHOXF1Q8NHV9 184 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 FAM81AQ8TBF8 368 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZBTB8AQ96BR9 441 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 TSSK6Q9BXA6 273 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 TEX12Q9BXU0 123 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms