RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DUX4L7P0CJ90 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 HSD3B2P26439 372 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 GRPRP30550 384 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 TEAD2Q15562 447 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 C1orf94Q6P1W5 598 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 SCAMP4Q969E2 229 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 S100PBPQ96BU1 408 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 MARS2Q96GW9 593 aaKnown RBP14.02□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF559Q9BR84 538 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 DUX4Q9UBX2 424 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 PLEKHA6Q9Y2H5 1048 aa14.02□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 NPIPB15A6NHN6 443 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 WRBO00258 174 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 FBP1P09467 338 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 CDK2P24941 298 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 AQP2P41181 271 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 NAA10P41227 235 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 P2RX1P51575 399 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 SSTP61278 116 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 NOGQ13253 232 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF177Q13360 481 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 ODF4Q2M2E3 257 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 TPRA1Q86W33 373 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 CAMKVQ8NCB2 501 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 SYNPRQ8TBG9 265 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 BRIX1Q8TDN6 353 aaKnown RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 ELF4Q99607 663 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-228ENST00000590347 FAM86C1Q9NVL1 165 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 MBD2Q9UBB5 411 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 MYO7AQ13402 2215 aa14.02□□□□□ -0.17
CIRBP-228ENST00000590347 KPNA3O00505 521 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 EIF4E2O60573 245 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 S100A8P05109 93 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 ID4P47928 161 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF383Q8NA42 475 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 OR4A4PQ8NGN8 299 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 DOK4Q8TEW6 326 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 TMEM255BQ8WV15 326 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 PARP12Q9H0J9 701 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 KDELR3O43731 214 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 TRHRP34981 398 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF750Q32MQ0 723 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 GFOD2Q3B7J2 385 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 RNF165Q6ZSG1 346 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 CHCHD4Q8N4Q1 142 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 OR4C16Q8NGL9 310 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 GGACTQ9BVM4 153 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 PIGMQ9H3S5 423 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 EXO5Q9H790 373 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 RPS10P5Q9NQ39 176 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 MRPS18AQ9NVS2 196 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 KCNE3Q9Y6H6 103 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 TDRD15B5MCY1 1934 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 KIF26AQ9ULI4 1882 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 A0A1W2PRQ8 180 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 AQP8O94778 261 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 OR8U8P0C7N1 319 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 AVPR2P30518 371 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 DLSTP36957 453 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 RIDAP52758 137 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 FAM69AQ5T7M9 428 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 LHX8Q68G74 356 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 MACC1Q6ZN28 852 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 TMEM200AQ86VY9 491 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 VRK2Q86Y07 508 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 FAM98AQ8NCA5 519 aaKnown RBP14.01□□□□□ -0.17
CIRBP-228ENST00000590347 NDC1Q9BTX1 674 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 MAGEH1Q9H213 219 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 TRPM7Q96QT4 1865 aa14.01□□□□□ -0.17
CIRBP-228ENST00000590347 NR2C1P13056 603 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 CPN1P15169 458 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 SOX2P48431 317 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 PNLIPRP1P54315 467 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF234Q14588 700 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 MRM1Q6IN84 353 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 JMJD6Q6NYC1 403 aaPredicted RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF836Q6ZNA1 936 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 MISPQ8IVT2 679 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 DNAJA3Q96EY1 480 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 DPH1Q9BZG8 443 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 OR2S2Q9NQN1 319 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 DOCK6Q96HP0 2047 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 NDUFB6O95139 128 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 IGHA1P01876 353 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 SNRNP70P08621 437 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 CLTBP09497 229 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 UBBP0CG47 229 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 UBCP0CG48 685 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 MGMTP16455 207 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 G0S2P27469 103 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 HTR1FP30939 366 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 SLC11A1P49279 550 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 RPS27AP62979 156 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 UBA52P62987 128 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 PGGHGQ32M88 737 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 GTPBP8Q8N3Z3 284 aaPredicted RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 SLAMF9Q96A28 289 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 CNTNAP3BQ96NU0 1288 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms