RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CPSF4LA6NMK7 179 aaKnown RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 EIF1BO60739 113 aaKnown RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 HCN1O60741 890 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR6A2O95222 327 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 AHSA1O95433 338 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 WDPCPO95876 746 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 SCGB1D2O95969 90 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 MT-ND1P03886 318 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ALPLP05186 524 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 GKN3PP0CG01 181 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NR2C1P13056 603 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 CHMP24386 653 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 DPP4P27487 766 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 LIMS1P48059 325 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TNFSF10P50591 281 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 FOXL2P58012 376 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 CSNK2A1P68400 391 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF117Q03924 483 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 PRKCDQ05655 676 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TSPAN31Q12999 210 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 BCL2A1Q16548 175 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NKPD1Q17RQ9 610 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 EXOC3L2Q2M3D2 409 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 IQCCQ4KMZ1 466 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF766Q5HY98 468 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OTUD3Q5T2D3 398 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 RPUSD3Q6P087 351 aaKnown RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 C1orf94Q6P1W5 598 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 FAHD1Q6P587 224 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 PODNL1Q6PEZ8 512 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 UNQ6494/PRO21346Q6UXR6 183 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 LINC00696Q6ZRV3 163 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TMPRSS11FQ6ZWK6 438 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 MAMDC2Q7Z304 686 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TSPYL5Q86VY4 417 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 MARCH9Q86YJ5 346 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 LILRA2Q8N149 483 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 DHRSXQ8N5I4 330 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 SCAIQ8N9R8 606 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR2M3Q8NG83 312 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR4K5Q8NGD3 323 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR52L1Q8NGH7 329 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR4C15Q8NGM1 316 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 OR52J3Q8NH60 311 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 SLC7A13Q8TCU3 470 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 MAGEE2Q8TD90 523 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 LIPHQ8WWY8 451 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NTNG2Q96CW9 530 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 RNF31Q96EP0 1072 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 SH3YL1Q96HL8 342 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NAF1Q96HR8 494 aaKnown RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 HRASLS5Q96KN8 279 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 Q96MT0 163 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NODALQ96S42 347 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 FEVQ99581 238 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 CIB1Q99828 191 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF426Q9BUY5 554 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TAPBPLQ9BX59 468 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ASPNQ9BXN1 380 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 SEMA6AQ9H2E6 1030 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF552Q9H707 407 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 LIN28AQ9H9Z2 209 aaKnown RBP6.64□□□□□ -1.35
SMAD4-210ENST00000590061 NTN4Q9HB63 628 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ACKR4Q9NPB9 350 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 MED17Q9NVC6 651 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 CHRNA9Q9UGM1 479 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF229Q9UJW7 825 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 TRAPPC4Q9Y296 219 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 C15orf41Q9Y2V0 281 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF337Q9Y3M9 751 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 EXPH5Q8NEV8 1989 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 ACACBO00763 2458 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 IGF2RP11717 2491 aa6.64□□□□□ -1.35
SMAD4-210ENST00000590061 CHD8Q9HCK8 2581 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 TMED7-TICAM2A0A0A6YYA0 188 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 NPIPA5A0A0B4J1W7 369 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 SAC3D1A6NKF1 404 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 EFCAB9A8MZ26 197 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 NPIPA7E9PJI5 369 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 FFAR1O14842 300 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 TLX3O43711 291 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 NEURL1O76050 574 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 VAMP5O95183 116 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 ACTL6AO96019 429 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 IFNGP01579 166 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 NPIPA8P0DM63 369 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 SAGP10523 405 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 OSMP13725 252 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 APEHP13798 732 aaKnown RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 ZNF26P17031 533 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 PRKCAP17252 672 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 HK1P19367 917 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 TACR3P29371 465 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 ERFP50548 548 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 SMSP52788 366 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 TPD52P55327 224 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-210ENST00000590061 CDC42P60953 191 aa6.63□□□□□ -1.35
SMAD4-210ENST00000590061 RPS3AP61247 264 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms