RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ATG4DQ86TL0 474 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 NPEPL1Q8NDH3 523 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 SNX33Q8WV41 574 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 PGLYRP3Q96LB9 341 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 OR8D2Q9GZM6 311 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 C12orf10Q9HB07 376 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 ST6GALNAC2Q9UJ37 374 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 ZNF221Q9UK13 617 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 CEP192Q8TEP8 1941 aa17.53■□□□□ 0.4
PRKCSH-209ENST00000589838 MEIOCA2RUB1 952 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 PLA2G10O15496 165 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 DUX1O43812 170 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 SDC3O75056 442 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 APEHP13798 732 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 ACVR1BP36896 505 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 MAP2K3P46734 347 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 OR1D4P47884 311 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 KCNAB1Q14722 419 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 QPRTQ15274 297 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 ELAVL1Q15717 326 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 RPL22L1Q6P5R6 122 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 NUP54Q7Z3B4 507 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 LSRQ86X29 649 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 GPR135Q8IZ08 494 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 NLGN4YQ8NFZ3 816 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 OR5J2Q8NH18 312 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 GHSRQ92847 366 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 ZC3HAV1LQ96H79 300 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 DDOQ99489 341 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 NXF5Q9H1B4 397 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 ADAM18Q9Y3Q7 739 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 NPFFR2Q9Y5X5 522 aa17.52■□□□□ 0.4
PRKCSH-209ENST00000589838 IGKV1D-42A0A075B6H8 117 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 IGHV1OR21-1A0A087WYE8 117 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 IGKV3D-11A0A0A0MRZ8 115 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 TRAV1-2A0A0B4J238 106 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 HMX3A6NHT5 357 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 A8MUA0 341 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 H3BMH7 237 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 IMPA2O14732 288 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 NUDT21O43809 227 aaKnown RBP17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 HYAL3O43820 417 aaPredicted RBP17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 TFP02787 698 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 SPI1P17947 270 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 CCR4P51679 360 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 SMAD2Q15796 467 aaKnown RBP17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 CCDC58Q4VC31 144 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 SSX6Q7RTT6 188 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 C10orf53Q8N6V4 93 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 GATSQ8NAP1 163 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 FRMD6Q96NE9 622 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 NMNAT3Q96T66 252 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 NMNAT2Q9BZQ4 307 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 LAT2Q9GZY6 243 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 RNF121Q9H920 327 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 MARCH7Q9H992 704 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 CYSLTR2Q9NS75 346 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 EXTL2Q9UBQ6 330 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 MALT1Q9UDY8 824 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 HIF3AQ9Y2N7 669 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 PCDH15Q96QU1 1955 aa17.52■□□□□ 0.39
PRKCSH-209ENST00000589838 LRRN3E7EW58 273 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 DVL2O14641 736 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 GATBO75879 557 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 ARL6IP5O75915 188 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 IGKV3-11P04433 115 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 ELK1P19419 428 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 OR1D5P58170 312 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 STARD6P59095 220 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 ERVK-25P63136 954 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 SIRPAP78324 504 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 CDK5R1Q15078 307 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 P2RY14Q15391 338 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 SF3A2Q15428 464 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 CD226Q15762 336 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF74Q16587 644 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 TP53I3Q53FA7 332 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 YOD1Q5VVQ6 348 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 HLA-DQA1Q5Y7H0 255 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 SFXN4Q6P4A7 337 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 NCCRP1Q6ZVX7 275 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 JAZF1Q86VZ6 243 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 C17orf47Q8NEP4 570 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 C1orf216Q8TAB5 229 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 ITFG2Q969R8 447 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 SMIM19Q96E16 107 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 LMF1Q96S06 567 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 LRRN3Q9H3W5 708 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 NANSQ9NR45 359 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 UCKL1Q9NWZ5 548 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 GON4LQ3T8J9 2241 aa17.51■□□□□ 0.39
PRKCSH-209ENST00000589838 TMEM265A0A087WTH1 108 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 B4DXG7 233 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 GLCEO94923 617 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 CD14P08571 375 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 FBLP22087 321 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 CSNK1EP49674 416 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 GDI2P50395 445 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms