RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 RDH10Q8IZV5 341 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ALG12Q9BV10 488 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ASB6Q9NWX5 421 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF69Q9UC07 566 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 DIMT1Q9UNQ2 313 aaKnown RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 VAMP1P23763 118 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 MVDP53602 400 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 WBP2NLQ6ICG8 309 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 KCTD18Q6PI47 426 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 KIRREL2Q6UWL6 708 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ESPNLQ6ZVH7 1005 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 NANOGP1Q8N7R0 232 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 OR5AK2Q8NH90 309 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 APH1BQ8WW43 257 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 FKBP10Q96AY3 582 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 LCORQ96JN0 433 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 NKX3-1Q99801 234 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 DPAGT1Q9H3H5 408 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 LYRM4Q9HD34 91 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 BCL2L10Q9HD36 194 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 NUDT15Q9NV35 164 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 A0A0B4J203 849 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 CDC42EP2O14613 210 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 PRPS1P60891 318 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 PLK5Q496M5 336 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 UBE2UQ5VVX9 321 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 HDDC2Q7Z4H3 204 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 OPALINQ96PE5 141 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 KLF15Q9UIH9 416 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 RALGAPA2Q2PPJ7 1873 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 ISPDA4D126 451 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 IL9P15248 144 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 RAB15P59190 212 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 LRRC37A5PQ49AS3 106 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 NXNL2Q5VZ03 156 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 GDPGP1Q6ZNW5 385 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 EGFL6Q8IUX8 553 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 FAM26EQ8N5C1 309 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 BCORP1Q8N888 145 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 GPA33Q99795 319 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
RETREG3-208ENST00000589797 BCL2L14Q9BZR8 327 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 FBXL3Q9UKT7 428 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 CAPZBP47756 277 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 PITPNAQ00169 270 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 P2RY14Q15391 338 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF425Q6IV72 752 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 ARMC10Q8N2F6 343 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 MINDY2Q8NBR6 621 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 CCDC74AQ96AQ1 378 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 GABRG3Q99928 467 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 OR10A4Q9H209 315 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 COMMD9Q9P000 198 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 SUSD2Q9UGT4 822 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 SIP14410 1827 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 HEATR5BQ9P2D3 2071 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 C4orf51C9J302 202 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 DNM1P34Q6PK57 102 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 FOXRED2Q8IWF2 684 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 GPR119Q8TDV5 335 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
RETREG3-208ENST00000589797 LYRM1O43325 122 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 MRPS14O60783 128 aaKnown RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 PNMTP11086 282 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 SNRPGP62308 76 aaKnown RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ACTA2P62736 377 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ACTG2P63267 376 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ZIC1Q15915 447 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 LAIR1Q6GTX8 287 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 LRRC56Q8IYG6 542 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF440Q8IYI8 595 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 STT3BQ8TCJ2 826 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 CASTOR1Q8WTX7 329 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 EDAQ92838 391 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 SMOC1Q9H4F8 434 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ZMAT3Q9HA38 289 aaKnown RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TBCCD1Q9NVR7 557 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 DHDHQ9UQ10 334 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 MDC1Q14676 2089 aaKnown RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TRAV18A0A075B6X5 111 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 METTL12A8MUP2 240 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 PLGLB1Q02325 96 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 DUSP8Q13202 625 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 C3orf38Q5JPI3 329 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 OLFML2AQ68BL7 652 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 SLC16A12Q6ZSM3 486 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 FAM71F1Q96KD3 344 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 LHX9Q9NQ69 397 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms