RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CARD8Q9Y2G2 431 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 NTNG1Q9Y2I2 539 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 MAGED1Q9Y5V3 778 aaPredicted RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 SH3D21A4FU49 640 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 ZAR1LA6NP61 321 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 ZNF208O43345 1280 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 OIP5O43482 229 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 OR2T1O43869 369 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 LYPD3O95274 346 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 GASTP01350 101 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 ELK4P28324 431 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 IDH2P48735 452 aaKnown RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 MEOX1P50221 254 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 RNF144AP50876 292 aaPredicted RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 CCR4P51679 360 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 PRPS1P60891 318 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 KLRB1Q12918 225 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 GLYR1Q49A26 553 aaPredicted RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 SLC25A30Q5SVS4 291 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 MEDAGQ5VYS4 303 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 SLX4IPQ5VYV7 408 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 KLHL17Q6TDP4 642 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 CASP12Q6UXS9 341 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 HMGN2P46Q86SG4 172 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 MARCH3Q86UD3 253 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 NRMQ8IXM6 262 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 CADM2Q8N3J6 435 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 WDSUB1Q8N9V3 476 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 BPIFA2Q96DR5 249 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 C5orf34Q96MH7 638 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 BARD1Q99728 777 aaKnown RBP11.45□□□□□ -0.58
VMP1-202ENST00000585847 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 WFDC6Q9BQY6 131 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 TAS2R10Q9NYW0 307 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 IL20Q9NYY1 176 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 SHANK1Q9Y566 2161 aa11.45□□□□□ -0.58
VMP1-202ENST00000585847 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 H3BN98 237 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 LINC01387J3KSC0 135 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 SNPHO15079 494 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 SCO2O43819 266 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 GLSO94925 669 aaPredicted RBP11.44□□□□□ -0.58
VMP1-202ENST00000585847 P04436 131 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 HMGN1P05114 100 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 LYNP07948 512 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 ZNF17P17021 662 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 BMP7P18075 431 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 CHMP24386 653 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 CXCR1P25024 350 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 TUBA4AP68366 448 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 LAPTM4AQ15012 233 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 ZNF620Q6ZNG0 422 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 GALNT5Q7Z7M9 940 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 NKAIN4Q8IVV8 208 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 ZFP62Q8NB50 900 aaPredicted RBP11.44□□□□□ -0.58
VMP1-202ENST00000585847 TMEM178AQ8NBL3 297 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 OR2T33Q8NG76 320 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 GPR119Q8TDV5 335 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 TMEM255BQ8WV15 326 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
VMP1-202ENST00000585847 ZNF524Q96C55 264 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 MUS81Q96NY9 551 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 VCX3AQ9NNX9 186 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 SERINC1Q9NRX5 453 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 REV1Q9UBZ9 1251 aa11.44□□□□□ -0.58
VMP1-202ENST00000585847 KLF13Q9Y2Y9 288 aaPredicted RBP11.44□□□□□ -0.58
VMP1-202ENST00000585847 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 TRIM64A6NGJ6 449 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 UNC119BA6NIH7 251 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 A8MVM7 634 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 NUDT14O95848 222 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 THY1P04216 161 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 RFPL3SP0C7P2 107 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 IFI30P13284 250 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 APEHP13798 732 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 RFC3P40938 356 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 ISL1P61371 349 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 HOXC5Q00444 222 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 IL1RL1Q01638 556 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 PPP1R8Q12972 351 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 PTGES3Q15185 160 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 QPRTQ15274 297 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 HYAL4Q2M3T9 481 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 ZIK1Q3SY52 487 aaPredicted RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 ZNF324BQ6AW86 544 aaPredicted RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 CBLN3Q6UW01 205 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 PLCZ1Q86YW0 608 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 LURAP1LQ8IV03 231 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 P3H2Q8IVL5 708 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 FADS6Q8N9I5 356 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 GATSQ8NAP1 163 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 OR4K17Q8NGC6 315 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms