RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 LSSP48449 732 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 IKZF1Q13422 519 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MANEAQ5SRI9 462 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DGAT2L6Q6ZPD8 337 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SLC35F2Q8IXU6 374 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR56B4Q8NH76 319 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR14A16Q8NHC5 309 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BAHD1Q8TBE0 780 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ORAI3Q9BRQ5 295 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CAPN10Q9HC96 672 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TMA7Q9Y2S6 64 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ENTPD2Q9Y5L3 495 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MCIDASD6RGH6 385 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SLC22A5O76082 557 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RASGRP1O95267 797 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CRYZL1O95825 349 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MT-ND4P03905 459 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 WNT1P04628 370 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GUSBP08236 651 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UQCRC1P31930 480 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NUDT1P36639 197 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UBE2NLQ5JXB2 153 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ULK3Q6PHR2 472 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UNQ9370/PRO34162Q6UXP9 181 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PRSS45Q7RTY3 260 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FGD2Q7Z6J4 655 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RPLP0P6Q8NHW5 317 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LGALS14Q8TCE9 139 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BMFQ96LC9 184 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GABRG3Q99928 467 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CCDC86Q9H6F5 360 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GNG8Q9UK08 70 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 IER3IP1Q9Y5U9 82 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 REV3LO60673 3130 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MEIKINA0A087WXM9 373 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 APBB3O95704 486 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 IGKV1D-16P01601 117 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RAF1P04049 648 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SYPP08247 313 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SLC35E2P0CK97 266 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TYRP1P17643 537 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DIO1P49895 249 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PON3Q15166 354 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR4N2Q8NGD1 307 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PHYHIPQ92561 330 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 AUNIPQ9H7T9 357 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF879B4DU55 563 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF749O43361 778 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SRMP19623 302 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 S1PR1P21453 382 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 EDNRAP25101 427 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GDNFP39905 211 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LGALS3BPQ08380 585 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 KIRREL2Q6UWL6 708 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CMTM4Q8IZR5 234 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BEST4Q8NFU0 473 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNRF4Q8WWF5 429 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DERL3Q96Q80 235 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NCDNQ9UBB6 729 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ADAM18Q9Y3Q7 739 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 COL4A2P08572 1712 aa13.03□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LINC00862A6NCI5 91 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GPRIN2O60269 458 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CA3P07451 260 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 COL9A1P20849 921 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MTFR2Q6P444 385 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SPERTQ8NA61 448 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FGF14Q92915 247 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DDOQ99489 341 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 COPS3Q9UNS2 423 aa13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 C2orf74A8MZ97 194 aa13.02□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GNB5O14775 395 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms