RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SNRNP200O75643 2136 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CACNA1IQ9P0X4 2223 aa10.73□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A0G2JMP0 313 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A1W2PPK0 400 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TCRBV21S2A2A0A5A6 115 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM25AB3EWG3 89 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM25CB3EWG5 89 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM25GB3EWG6 89 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DPM1O60762 260 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GATBO75879 557 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 EPPINO95925 133 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GAAP10253 952 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PEPDP12955 493 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 F8A1P23610 371 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PSMD4P55036 377 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RPS21P63220 83 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DPTQ07507 201 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 QPRTQ15274 297 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GLYR1Q49A26 553 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC35F1Q5T1Q4 408 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PRICKLE2Q7Z3G6 844 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SNAPC3Q92966 411 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KCTD7Q96MP8 289 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TRAF4Q9BUZ4 470 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CDCP1Q9H5V8 836 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZMAT3Q9HA38 289 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 P4HTMQ9NXG6 502 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DSPPQ9NZW4 1301 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TNFRSF4P43489 277 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ADPRHP54922 357 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SELENOVP59797 346 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTBP60709 375 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTA2P62736 377 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTG1P63261 375 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTG2P63267 376 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTC1P68032 377 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACTA1P68133 377 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MLF2Q15773 248 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TRIQKQ629K1 86 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 Q7L0L9 218 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 VRK2Q86Y07 508 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MARCH9Q86YJ5 346 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DEFB119Q8N690 84 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF511Q8NB15 262 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C19orf18Q8NEA5 215 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SMPDL3AQ92484 453 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SENP5Q96HI0 755 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SAP130Q9H0E3 1048 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C6orf106Q9H6K1 298 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CLCA2Q9UQC9 943 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HSPB11Q9Y547 144 aa10.72□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM240BA0A1B0GVZ2 78 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A1W2PRG6 482 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TEX46H3BTG2 121 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SOX1O00570 391 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MPZL2O60487 215 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RAB36O95755 333 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SERPINA3P01011 423 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MSX1P28360 303 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 INPP1P49441 399 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ANXA11P50995 505 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NCBP2P52298 156 aaKnown RBP eCLIP10.71□□□□□ -0.696e-7■■■■□ 23.5
CDK5RAP3-231ENST00000584063 SLC16A1P53985 500 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HSF2Q03933 536 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CSTF1Q05048 431 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PUDPQ08623 228 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ILF3Q12906 894 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CEBPEQ15744 281 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF542PQ5EBM4 170 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PRAMEF20Q5VT98 475 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C12orf73Q69YU5 71 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RLN3Q8WXF3 142 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RNF170Q96K19 258 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MRGPRX1Q96LB2 322 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF354BQ96LW1 612 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DPH7Q9BTV6 452 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GSDMCQ9BYG8 508 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GLIPR2Q9H4G4 154 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C19orf12Q9NSK7 152 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MAN2C1Q9NTJ4 1040 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CABIN1Q9Y6J0 2220 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZDBF2Q9HCK1 2354 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ADAM20O43506 726 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LANCL1O43813 399 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ONECUT2O95948 504 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PDGFAP04085 211 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CHRM4P08173 479 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC35G4P0C7Q5 338 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NR2F6P10588 404 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DDOSTP39656 456 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OMPP47874 163 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM107Q6UX40 140 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TRIM69Q86WT6 500 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 VWA5B2Q8N398 1253 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms