RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SUDS3Q9H7L9 328 aaPredicted RBP3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 APMAPQ9HDC9 416 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 POLE4Q9NR33 117 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 TMCC3Q9ULS5 477 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 NEU3Q9UQ49 428 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 ASF1AQ9Y294 204 aa3.78□□□□□ -1.8
SMARCE1-219ENST00000583294 RPAP1Q9BWH6 1393 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 PLEKHH1Q9ULM0 1364 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 SH3TC1Q8TE82 1336 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 IGHV1OR21-1A0A087WYE8 117 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 UGT1A9O60656 530 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 SCGNO76038 276 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 AZU1P20160 251 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 NPR2P20594 1047 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 CXCR2P25025 360 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 HTR1EP28566 365 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 GNA11P29992 359 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 EFNB2P52799 333 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 GBX2P52951 348 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 FGL1Q08830 312 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 DPYSL2Q16555 572 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 OR2G6Q5TZ20 316 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 OR4F3Q6IEY1 312 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 PGAP1Q75T13 922 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 GDPD3Q7L5L3 318 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 PPP1R42Q7Z4L9 355 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 ARL6IP6Q8N6S5 226 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 NEIL3Q8TAT5 605 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 RNF138Q8WVD3 245 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 RDH5Q92781 318 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 CMTM7Q96FZ5 175 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 PAGE5Q96GU1 130 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 TIMD4Q96H15 378 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 SLC38A2Q96QD8 506 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 RNF2Q99496 336 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 REEP4Q9H6H4 257 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 THUMPD1Q9NXG2 353 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 CLEC4AQ9UMR7 237 aa3.77□□□□□ -1.81
SMARCE1-219ENST00000583294 WI2-2373I1.2A0A1W2PRP0 233 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 GFYI3L273 518 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 ZNF208O43345 1280 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 HCRTR1O43613 425 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 SPAG6O75602 509 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 KLF8O95600 359 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 RFC4P35249 363 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 QARSP47897 775 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 NUP107P57740 925 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 UBE2HP62256 183 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 DAZ2Q13117 558 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 EXOC3L2Q2M3D2 409 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 SAMD4BQ5PRF9 694 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 TIGD3Q6B0B8 471 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 OR52E8Q6IFG1 317 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 TMIGD1Q6UXZ0 262 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 HSDL2Q6YN16 418 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 RGS9BPQ6ZS82 235 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 RNF165Q6ZSG1 346 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 NLRP9Q7RTR0 991 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 SLC26A11Q86WA9 606 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 TBC1D21Q8IYX1 336 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 FAM133AQ8N9E0 248 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 MFSD9Q8NBP5 474 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 UCN3Q969E3 161 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 UBE2E3Q969T4 207 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 MRPL45Q9BRJ2 306 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 CAPS2Q9BXY5 557 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 SELENOIQ9C0D9 397 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 SLC25A22Q9H936 323 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 CDH9Q9ULB4 789 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 PNPLA6Q8IY17 1366 aa3.76□□□□□ -1.81
SMARCE1-219ENST00000583294 PHF3Q92576 2039 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 TRAV26-1A0A087WT03 109 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 NSG1A0A0A6YYJ2 146 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 TCRBV9S1A1TA0A576 114 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 MED7O43513 233 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 NPIPB7O75200 414 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 OXSR1O95747 527 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 KRT6AP02538 564 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 POU2F1P14859 743 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 GRIA1P42261 906 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 GSSP48637 474 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 GPM6AP51674 278 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 ZNF133P52736 654 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 KLRB1Q12918 225 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 GPM6BQ13491 265 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 PDK3Q15120 406 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 DUSP7Q16829 419 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 LRRC23Q53EV4 343 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 SFT2D3Q587I9 215 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 CARD16Q5EG05 197 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 C1orf100Q5SVJ3 147 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 C1orf220Q5T0J3 134 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 PDZK1Q5T2W1 519 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 C11orf71Q6IPW1 123 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 Q6ZN92 141 aa3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 Q6ZPB1 254 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-219ENST00000583294 RDH10Q8IZV5 341 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms