RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 GPATCH1Q9BRR8 931 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 TAPBPLQ9BX59 468 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 POTEKPQ9BYX7 375 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 BCO1Q9HAY6 547 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 TMEM27Q9HBJ8 222 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 SELENONQ9NZV5 590 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 EMC3Q9P0I2 261 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 ING1Q9UK53 422 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 USP22Q9UPT9 525 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 DCHS2Q6V1P9 2916 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 A6NNC1 897 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 FAM220BPB1ANY3 271 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 M0R3H8 397 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 AHSA1O95433 338 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 LGI1O95970 557 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 CCKARP32238 428 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 PCYT1AP49585 367 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 NUDT2P50583 147 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ALG10BQ5I7T1 473 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 OTUD3Q5T2D3 398 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ANKRD34AQ69YU3 496 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 TFAP2EQ6VUC0 442 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ARPINQ7Z6K5 226 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 CCDC103Q8IW40 242 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 GPR32P1Q8NGA4 272 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 STK35Q8TDR2 534 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 DNAJA4Q8WW22 397 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 TAMM41Q96BW9 452 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 CMTM5Q96DZ9 223 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ZNF583Q96ND8 569 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ARHGDIGQ99819 225 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 MED18Q9BUE0 208 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 MYLK2Q9H1R3 596 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 EFCAB1Q9HAE3 211 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 ADPRHL2Q9NX46 363 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 TESMINQ9Y4I5 508 aa11.2□□□□□ -0.62
SMARCE1-218ENST00000582955 LIPT2A6NK58 231 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ZNF716A6NP11 495 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ZNF814B7Z6K7 855 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 GPR171O14626 319 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 RAMP1O60894 148 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 CTAG2O75638 210 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 AKR7A3O95154 331 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 C8BP07358 591 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 PNMTP11086 282 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 CD247P20963 164 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 GTF2E2P29084 291 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 VEZF1Q14119 521 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 DAZAP2Q15038 168 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 PDK3Q15120 406 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 OR1Q1Q15612 314 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 NRF1Q16656 503 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ULK3Q6PHR2 472 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 PAQR6Q6TCH4 344 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 C6orf89Q6UWU4 347 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 CCDC80Q76M96 950 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ZNF100Q8IYN0 542 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 OR2T12Q8NG77 320 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 SLC47A1Q96FL8 570 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ZC3HAV1LQ96H79 300 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 WFIKKN1Q96NZ8 548 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 MCHR1Q99705 422 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 POLDIP3Q9BY77 421 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 C12orf10Q9HB07 376 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 CMTM6Q9NX76 183 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 AP3M1Q9Y2T2 418 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 NOSIPQ9Y314 301 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 APCP25054 2843 aa11.19□□□□□ -0.62
SMARCE1-218ENST00000582955 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 ELOVL7A1L3X0 281 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 CPSF4LA6NMK7 179 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 TPST2O60704 377 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 NPIPB7O75200 414 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 IFNA14P01570 189 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 RPS5P46782 204 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 OR3A2P47893 321 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 SLC7A2P52569 658 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 H3F3AP84243 136 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 POU4F3Q15319 338 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 LRRC23Q53EV4 343 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 STAC2Q6ZMT1 411 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 CXorf67Q86X51 503 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 P3H2Q8IVL5 708 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 SLC15A3Q8IY34 581 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 MICU2Q8IYU8 434 aa11.18□□□□□ -0.62
SMARCE1-218ENST00000582955 TMEM99Q8N816 258 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms