RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 H3BMQ9 156 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 BLOC1S5-TXNDC5H3BN57 136 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 CDC42EP2O14613 210 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 EFSO43281 561 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 KLF4O43474 513 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 IDH3BO43837 385 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LYPD3O95274 346 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 PPP1R3DO95685 299 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LCKP06239 509 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TSPAN19P0C672 248 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 SFTPCP11686 197 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 MSX1P28360 303 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 GTF2E2P29084 291 aaKnown RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 POLR2HP52434 150 aaKnown RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 GP2P55259 537 aaKnown RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 ZNF117Q03924 483 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TMED1Q13445 227 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LSAMPQ13449 338 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TGIF1Q15583 401 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 DGUOKQ16854 277 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 FNDC7Q5VTL7 733 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 NXNL2Q5VZ03 156 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 GTF2IRD2BQ6EKJ0 949 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LCN10Q6JVE6 187 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 OPN5Q6U736 354 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 C5orf46Q6UWT4 87 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TMPRSS11AQ6ZMR5 421 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 WDR88Q6ZMY6 472 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 NDUFAF7Q7L592 441 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 MRGPREQ86SM8 312 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ADCK1Q86TW2 530 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 GTF2IRD2Q86UP8 949 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 JAZF1Q86VZ6 243 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 CPOQ8IVL8 374 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 LNX2Q8N448 690 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ZNF441Q8N8Z8 693 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 APCDD1LQ8NCL9 501 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 PSD4Q8NDX1 1056 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 FAM71CQ8NEG0 241 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 OR2Y1Q8NGV0 311 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 OR4Q3Q8NH05 313 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 M1APQ8TC57 530 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ASB15Q8WXK1 588 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 NKD1Q969G9 470 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 PMEPA1Q969W9 287 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 C3orf49Q96BT1 292 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ARSGQ96EG1 525 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 COG8Q96MW5 612 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 RHNO1Q9BSD3 238 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ZNF700Q9H0M5 742 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 GPN2Q9H9Y4 310 aaPredicted RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 TIMMDC1Q9NPL8 285 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 MEPEQ9NQ76 525 aaPredicted RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 SERINC1Q9NRX5 453 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 C20orf141Q9NUB4 165 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TAS2R10Q9NYW0 307 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 MYOTQ9UBF9 498 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 ENPP5Q9UJA9 477 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 PPIEQ9UNP9 301 aaKnown RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 DIMT1Q9UNQ2 313 aaKnown RBP8.47□□□□□ -1.05
SS18-220ENST00000582092 SIGLEC7Q9Y286 467 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 SLC6A5Q9Y345 797 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 FREM2Q5SZK8 3169 aa8.47□□□□□ -1.05
SS18-220ENST00000582092 TMED7-TICAM2A0A0A6YYA0 188 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 CCRL2O00421 344 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 AIREO43918 545 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 FADS1O60427 444 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PTP4A3O75365 173 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 OR2J2O76002 312 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 AHSA1O95433 338 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ITGB2P05107 769 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ADORA3P0DMS8 318 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PEPDP12955 493 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 HTR1FP30939 366 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 OTX2P32243 289 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 MASP1P48740 699 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ZNF41P51814 821 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 SUMO3P55854 103 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 FBXW4P57775 412 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 FOXL2P58012 376 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 POU4F2Q12837 409 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 QPRTQ15274 297 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 SPHARQ15513 63 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 LCN1P1Q5VSP4 162 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 CBLN3Q6UW01 205 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 DPY19L2P2Q6ZN68 376 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 MEPCEQ7L2J0 689 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 NANOGNBQ7Z5D8 188 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 BCDIN3DQ7Z5W3 292 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 ATG4DQ86TL0 474 aaPredicted RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms