RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RETREG3Q86VR2 466 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 HSD17B8Q92506 261 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 C3orf49Q96BT1 292 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 RSPO3Q9BXY4 272 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-220ENST00000581707 UBTD1Q9HAC8 227 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 LIPT2A6NK58 231 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 A8MVM7 634 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 MRPL33O75394 65 aaKnown RBP17.25■□□□□ 0.35
SREBF1-220ENST00000581707 LYZL6O75951 148 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 GPIP06744 558 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 NTF4P34130 210 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 OR7A5Q15622 319 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 ACKR1Q16570 336 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 DHRS4L2Q6PKH6 230 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 UBE2J2Q8N2K1 259 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 APH1AQ96BI3 265 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 PLPPR2Q96GM1 343 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 ANKRD27Q96NW4 1050 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 ZNF607Q96SK3 696 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 CGREF1Q99674 301 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 FGFR1OP2Q9NVK5 253 aa17.25■□□□□ 0.35
SREBF1-220ENST00000581707 PRORSD1PA6NEY8 169 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 TPST1O60507 370 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
SREBF1-220ENST00000581707 IGHV1-2P23083 117 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 AQP1P29972 269 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 ADSLP30566 484 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-220ENST00000581707 ARFIP2P53365 341 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 NFYCQ13952 458 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 SLC17A1Q14916 467 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 TAB1Q15750 504 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 HSP90B2PQ58FF3 399 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 OTUD3Q5T2D3 398 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-220ENST00000581707 FBXW9Q5XUX1 488 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 ATG4DQ86TL0 474 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-220ENST00000581707 TMEM99Q8N816 258 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 HIPK4Q8NE63 616 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 NGBQ9NPG2 151 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 BEX4Q9NWD9 120 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-220ENST00000581707 RPS6KB2Q9UBS0 482 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 DSCAMO60469 2012 aa17.24■□□□□ 0.35
SREBF1-220ENST00000581707 SERPINB7O75635 380 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 AKR7A3O95154 331 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 IGHV3-9P01782 118 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 COX5AP20674 150 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 MTPNP58546 118 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 CAPRIN1Q14444 709 aaKnown RBP17.23■□□□□ 0.35
SREBF1-220ENST00000581707 CYP51A1Q16850 503 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 C1orf140Q5VVS0 124 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 COMTD1Q86VU5 262 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 C11orf65Q8NCR3 313 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 STK35Q8TDR2 534 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 TAPBPLQ9BX59 468 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 MRGBPQ9NV56 204 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 PARPBPQ9NWS1 579 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 ADPRHL2Q9NX46 363 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 ANGPT4Q9Y264 503 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 FLVCR1Q9Y5Y0 555 aa17.23■□□□□ 0.35
SREBF1-220ENST00000581707 TMEM229AB2RXF0 380 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 NPIPB7O75200 414 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 GUCY1A3Q02108 690 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 RBBP4Q09028 425 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 SF3A3Q12874 501 aaKnown RBP eCLIP17.22■□□□□ 0.356e-8■■■■□ 20.7
SREBF1-220ENST00000581707 SELPLGQ14242 412 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 STK11Q15831 433 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 GLIPR1L2Q4G1C9 344 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 CGB2Q6NT52 195 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 CASP12Q6UXS9 341 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 ZNF704Q6ZNC4 412 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-220ENST00000581707 C20orf204Q6ZNR8 217 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 PTOV1Q86YD1 416 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 TGIF2LYQ8IUE0 185 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 ARMC8Q8IUR7 673 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 ZNF433Q8N7K0 673 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-220ENST00000581707 LSMEM1Q8N8F7 131 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-220ENST00000581707 PIGTQ969N2 578 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 ASB6Q9NWX5 421 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 SLC13A4Q9UKG4 626 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 SLC9A8Q9Y2E8 581 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 ARID1AO14497 2285 aa17.22■□□□□ 0.35
SREBF1-220ENST00000581707 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-220ENST00000581707 MTORP42345 2549 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 AQP7P3A6NL99 342 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 ELOA3DA6NLF2 546 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-220ENST00000581707 FBP2O00757 339 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 MFN2O95140 757 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 PLAUP00749 431 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 GGT1P19440 569 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 ELOA3BQ3SY89 546 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 P2RY8Q86VZ1 359 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 ELOA3Q8NG57 546 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 OR9K2Q8NGE7 335 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 OR52E4Q8NGH9 312 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 MUCL1Q96DR8 90 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 TMEM204Q9BSN7 226 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 SF3B5Q9BWJ5 86 aaKnown RBP17.21■□□□□ 0.35
SREBF1-220ENST00000581707 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 TRIM2Q9C040 744 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms