RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
SNORD55-201ENST00000581525 ULK3Q6PHR2 472 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 NUFIP2Q7Z417 695 aaKnown RBP11.23□□□□□ -0.61
SNORD55-201ENST00000581525 MFSD8Q8NHS3 518 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 SF3B5Q9BWJ5 86 aaKnown RBP11.23□□□□□ -0.61
SNORD55-201ENST00000581525 KLHL28Q9NXS3 571 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 CLEC4AQ9UMR7 237 aa11.23□□□□□ -0.61
SNORD55-201ENST00000581525 AKAP9Q99996 3911 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 ZNF814B7Z6K7 855 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 CTAG2O75638 210 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 SMNDC1O75940 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNORD55-201ENST00000581525 LYPD3O95274 346 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 PLGP00747 810 aaPredicted RBP11.22□□□□□ -0.61
SNORD55-201ENST00000581525 GPIP06744 558 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TFPIP10646 304 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 PSMB1P20618 241 aaKnown RBP11.22□□□□□ -0.61
SNORD55-201ENST00000581525 FPR1P21462 350 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 AQP1P29972 269 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 KDELR2P33947 212 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 NTF4P34130 210 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 UGT2B10P36537 528 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 OR3A2P47893 321 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 SIRPAP78324 504 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 HOXC5Q00444 222 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TLE4Q04727 773 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 SLC17A1Q14916 467 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 OR1Q1Q15612 314 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 NPTX1Q15818 432 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TMEM201Q5SNT2 666 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 C1orf140Q5VVS0 124 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 ZNF613Q6PF04 617 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TFAP2EQ6VUC0 442 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 STAC2Q6ZMT1 411 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 GABRG1Q8N1C3 465 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 CADM2Q8N3J6 435 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 SMYD1Q8NB12 490 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 OR4D11Q8NGI4 311 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 PIGXQ8TBF5 258 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 ZHX1-C8orf76Q96EF9 292 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 SLC47A1Q96FL8 570 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 PTDSS2Q9BVG9 487 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 HDHD5Q9BXW7 423 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 USP22Q9UPT9 525 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 TESMINQ9Y4I5 508 aa11.22□□□□□ -0.61
SNORD55-201ENST00000581525 IGKV1D-42A0A075B6H8 117 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 LOC102725191A0A1B0GVB3 256 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 ELOVL7A1L3X0 281 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 AQP7P3A6NL99 342 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 CCT8L1PA6NM43 557 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 C16orf97H3BN30 126 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 NME4O00746 187 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 NDUFAB1O14561 156 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 GPR171O14626 319 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 AIM2O14862 343 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 VAMP5O95183 116 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 THY1P04216 161 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 CCKARP32238 428 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 IDUAP35475 653 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 CPA2P48052 419 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 RGS8P57771 180 aaPredicted RBP11.21□□□□□ -0.61
SNORD55-201ENST00000581525 OR2B6P58173 313 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 BNIP2Q12982 314 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 CEACAM7Q14002 265 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 FXNQ16595 210 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 GALNT5Q7Z7M9 940 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 MICU2Q8IYU8 434 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 OR52E4Q8NGH9 312 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 OR6T1Q8NGN1 323 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 NAA11Q9BSU3 229 aaPredicted RBP11.21□□□□□ -0.61
SNORD55-201ENST00000581525 TMEM43Q9BTV4 400 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 ZNF426Q9BUY5 554 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.61
SNORD55-201ENST00000581525 POLR2J3Q9H1A7 115 aaKnown RBP11.21□□□□□ -0.61
SNORD55-201ENST00000581525 TMEM27Q9HBJ8 222 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 RASSF1Q9NS23 344 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.61
SNORD55-201ENST00000581525 A6NNC1 897 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 OR2T1O43869 369 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 RAMP1O60894 148 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 DCTN3O75935 186 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 FAM107AO95990 144 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 IFNA14P01570 189 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 POU2F1P14859 743 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 PPP3CBP16298 524 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 CCNA2P20248 432 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 SELENOWP63302 87 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 SNTB1Q13884 538 aaKnown RBP11.2□□□□□ -0.62
SNORD55-201ENST00000581525 P2RY6Q15077 328 aa11.2□□□□□ -0.62
SNORD55-201ENST00000581525 POU4F3Q15319 338 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms