RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TUBGCP2Q9BSJ2 902 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 ALG12Q9BV10 488 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 POPDC2Q9HBU9 364 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC35D1Q9NTN3 355 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 NUFIP1Q9UHK0 495 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 TP53TG5Q9Y2B4 290 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 LRP5LA4QPB2 252 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 E9PBE3 544 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 MBTPS2O43462 519 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 ICOSLGO75144 302 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 KIAA0754O94854 1291 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 HEXBP07686 556 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 CHTF8P0CG12 524 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 TSPY4P0CV99 314 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 TSPY10P0CW01 314 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 ICAM2P13598 275 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 RPS2P15880 293 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 IMPDH1P20839 514 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 ZNF763Q0D2J5 394 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 MESDQ14696 234 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 BCL7AQ4VC05 210 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 C6orf89Q6UWU4 347 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 FAM43BQ6ZT52 329 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 MFSD6LQ8IWD5 586 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR2L13Q8N349 312 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 SYT14Q8NB59 555 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR10G3Q8NGC4 313 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR6C4Q8NGE1 309 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR2T34Q8NGX1 318 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR1F12Q8NHA8 337 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 FANK1Q8TC84 345 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 ARPC1AQ92747 370 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 PAGE5Q96GU1 130 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 NAT9Q9BTE0 207 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 OR11A1Q9GZK7 315 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 SMPD3Q9NY59 655 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 TMOD2Q9NZR1 351 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 C6orf203Q9P0P8 240 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 PCSK1NQ9UHG2 260 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 STAP1Q9ULZ2 295 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 RPH3ALQ9UNE2 315 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 ASTN1O14525 1302 aa2.82□□□□□ -1.96
SMCHD1-204ENST00000581226 IDSB3KWA1 339 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 TMX2-CTNND1H3BSU7 103 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 SNAI2O43623 268 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 UGT1A9O60656 530 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 PFKFB2O60825 505 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 MOSP00540 346 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 DESP17661 470 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 MMP11P24347 488 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 GCAP28676 217 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 GLP1RP43220 463 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 VDAC2P45880 294 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 RGS4P49798 205 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 CCR6P51684 374 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 SUCLG1P53597 346 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 PKNOX1P55347 436 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 SNTB2Q13425 540 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 EBI3Q14213 229 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 GPNMBQ14956 572 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 BOLA3Q53S33 107 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 C10orf120Q5SQS8 335 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 BEND3Q5T5X7 828 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 COX15Q7KZN9 410 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 PRSS41Q7RTY9 318 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 CCDC50Q8IVM0 306 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 CCDC65Q8IXS2 484 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC35F2Q8IXU6 374 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 OR4K14Q8NGD5 310 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 OR4D5Q8NGN0 318 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 OR6X1Q8NH79 312 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 OR9G1Q8NH87 305 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 NDRG1Q92597 394 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 RNF185Q96GF1 192 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 FAM210BQ96KR6 192 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 ROGDIQ9GZN7 287 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 C20orf85Q9H1P6 137 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 RIBC2Q9H4K1 309 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 PATZ1Q9HBE1 687 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 CGNQ9P2M7 1197 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 COPS3Q9UNS2 423 aa2.81□□□□□ -1.96
SMCHD1-204ENST00000581226 COL4A4P53420 1690 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 KIF16BQ96L93 1317 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 ANKRD63C9JTQ0 380 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PES1O00541 588 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 XPO1O14980 1071 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 AGPAT2O15120 278 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 TBX19O60806 448 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PEX11AO75192 247 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 SLC25A27O95847 323 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 IGHG4P01861 327 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 KRT8P05787 483 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 KLK3P07288 261 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PNMTP11086 282 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 CRISP2P16562 243 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 PPT1P50897 306 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 DLX1P56177 255 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 HERVK_113P61574 105 aa2.8□□□□□ -1.96
SMCHD1-204ENST00000581226 ELP6Q0PNE2 266 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms