RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 TMEM255BQ8WV15 326 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 LRTOMTQ8WZ04 291 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 SGTBQ96EQ0 304 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 NPAS1Q99742 590 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 ASPNQ9BXN1 380 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 ZNF556Q9HAH1 456 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 NANSQ9NR45 359 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MCTS1Q9ULC4 181 aaKnown RBP12.85□□□□□ -0.35
SKA2-205ENST00000580541 CORINQ9Y5Q5 1042 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 U3KQV3 271 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MPDZO75970 2070 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
SKA2-205ENST00000580541 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 A0A0J9YW62 118 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 G3V2T6 193 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 TNFSF11O14788 317 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 OPN1LWP04000 364 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 TPOP07202 933 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 IFI30P13284 250 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 IL11P20809 199 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
SKA2-205ENST00000580541 DIO1P49895 249 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 CTBP2P56545 445 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 CLDN15P56746 228 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 CLDN20P56880 219 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 EGR4Q05215 589 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 OR4K5Q8NGD3 323 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 GNPDA2Q8TDQ7 276 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 BPIFA2Q96DR5 249 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 OR11A1Q9GZK7 315 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 TP63Q9H3D4 680 aaPredicted RBP12.84□□□□□ -0.35
SKA2-205ENST00000580541 FKRPQ9H9S5 495 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 CALHM2Q9HA72 323 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
SKA2-205ENST00000580541 MED12Q93074 2177 aa12.84□□□□□ -0.35
SKA2-205ENST00000580541 IGKV1D-42A0A075B6H8 117 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 A0A1W2PNR3 127 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 LIPT2A6NK58 231 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 H3BNX3 289 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 SLC19A2O60779 497 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 VAMP5O95183 116 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 OR6A2O95222 327 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 CH25HO95992 272 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 FCGR2AP12318 317 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ANXA8P13928 327 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZNF23P17027 643 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 FUT1P19526 365 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ENPP1P22413 925 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 LIMS1P48059 325 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SLC9A3P48764 834 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 HSF1Q00613 529 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 OR7A5Q15622 319 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 PRR30Q53SZ7 412 aaPredicted RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZNF585AQ6P3V2 769 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SHQ1Q6PI26 577 aaKnown RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 WDR88Q6ZMY6 472 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 PRICKLE2Q7Z3G6 844 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 AMIGO2Q86SJ2 522 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 GGNQ86UU5 652 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 NRMQ8IXM6 262 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 PQLC1Q8N2U9 271 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SCAIQ8N9R8 606 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 GALNT11Q8NCW6 608 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 DNAJC9Q8WXX5 260 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 TAAR8Q969N4 342 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 SLC25A36Q96CQ1 311 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 KTI12Q96EK9 354 aaPredicted RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 MGAT4BQ9UQ53 548 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 B3GALT5Q9Y2C3 310 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZNF835Q9Y2P0 537 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZNF175Q9Y473 711 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
SKA2-205ENST00000580541 ZC3H12DA2A288 527 aaKnown RBP12.82□□□□□ -0.36
SKA2-205ENST00000580541 ENO4A6NNW6 628 aa12.82□□□□□ -0.36
SKA2-205ENST00000580541 EFCAB9A8MZ26 197 aa12.82□□□□□ -0.36
SKA2-205ENST00000580541 SAGP10523 405 aaPredicted RBP12.82□□□□□ -0.36
SKA2-205ENST00000580541 GSTM3P21266 225 aa12.82□□□□□ -0.36
SKA2-205ENST00000580541 AGFG1P52594 562 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms