RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 C1orf140Q5VVS0 124 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 PAQR6Q6TCH4 344 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 C5orf46Q6UWT4 87 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 CASP12Q6UXS9 341 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 Q6ZT83 130 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 SPATA21Q7Z572 469 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 ATG4DQ86TL0 474 aaPredicted RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 CXorf67Q86X51 503 aaPredicted RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 UBE2J2Q8N2K1 259 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 SMYD1Q8NB12 490 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 RASSF5Q8WWW0 418 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 KISS1RQ969F8 398 aaPredicted RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 APH1AQ96BI3 265 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 ZNF775Q96BV0 537 aaPredicted RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 PIK3IP1Q96FE7 263 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 PIF1Q9H611 641 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 PARPBPQ9NWS1 579 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 ADPRHL2Q9NX46 363 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 C6orf203Q9P0P8 240 aaPredicted RBP10.32□□□□□ -0.76
GGA3-204ENST00000578208 ARMCX1Q9P291 453 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 SLC9A8Q9Y2E8 581 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 ABCA12Q86UK0 2595 aa10.32□□□□□ -0.76
GGA3-204ENST00000578208 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 A0A1B0GWA3 101 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 LIPT2A6NK58 231 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 TMEM229AB2RXF0 380 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 TPST1O60507 370 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 MRPL33O75394 65 aaKnown RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 MFN2O95140 757 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 CNOT4O95628 575 aaKnown RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 ADAP00813 363 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 OPN1SWP03999 348 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 HRGP04196 525 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 DNASE1P24855 282 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 SLC16A1P53985 500 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 PCBP3P57721 371 aaKnown RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 DMTNQ08495 405 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ITGADQ13349 1161 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 VMACQ2NL98 169 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 RABL3Q5HYI8 236 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ALG10BQ5I7T1 473 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 FAM91A1Q658Y4 838 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ERICH5Q6P6B1 374 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ULK3Q6PHR2 472 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ARPINQ7Z6K5 226 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 CCDC103Q8IW40 242 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 LSMEM1Q8N8F7 131 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 RP9Q8TA86 221 aaKnown RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 NINJ1Q92982 152 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 SLC38A4Q969I6 547 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 SLC47A1Q96FL8 570 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ELAC2Q9BQ52 826 aaKnown RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 NGBQ9NPG2 151 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 PRSS50Q9UI38 385 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ST6GALNAC2Q9UJ37 374 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 ING1Q9UK53 422 aaPredicted RBP10.31□□□□□ -0.76
GGA3-204ENST00000578208 AP3M1Q9Y2T2 418 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 APCP25054 2843 aa10.31□□□□□ -0.76
GGA3-204ENST00000578208 FBN2P35556 2912 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 AQP7P3A6NL99 342 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 ZNF814B7Z6K7 855 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 M0QX08 132 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 FXYD1O00168 92 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 GCM2O75603 506 aaPredicted RBP10.3□□□□□ -0.76
GGA3-204ENST00000578208 AKR7A3O95154 331 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 VAMP5O95183 116 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 C8BP07358 591 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 COX4I1P13073 169 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 HTR2AP28223 471 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 DNAJA1P31689 397 aaKnown RBP10.3□□□□□ -0.76
GGA3-204ENST00000578208 H3F3AP84243 136 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 BEX5Q5H9J7 111 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 SFRP5Q5T4F7 317 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 FBXW9Q5XUX1 488 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 TMEM225Q6GV28 225 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 ALKBH2Q6NS38 261 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 C6orf89Q6UWU4 347 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 PAMR1Q6UXH9 720 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 BHLHA15Q7RTS1 189 aaPredicted RBP10.3□□□□□ -0.76
GGA3-204ENST00000578208 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.3□□□□□ -0.76
GGA3-204ENST00000578208 CPLX4Q7Z7G2 160 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 GABRG1Q8N1C3 465 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 MFSD8Q8NHS3 518 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 NRGNQ92686 78 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 PROX1Q92786 737 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 S100PBPQ96BU1 408 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 SLC25A36Q96CQ1 311 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 RCN3Q96D15 328 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 EPYCQ99645 322 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 MCHR1Q99705 422 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 ARHGDIGQ99819 225 aa10.3□□□□□ -0.76
GGA3-204ENST00000578208 SF3B5Q9BWJ5 86 aaKnown RBP10.3□□□□□ -0.76
GGA3-204ENST00000578208 UPB1Q9UBR1 384 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms