RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GCKP35557 465 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ALDH6A1Q02252 535 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PRKCDQ05655 676 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FOXF1Q12946 379 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF239Q16600 458 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DCST1Q5T197 706 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 C3orf33Q6P1S2 294 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 C1orf94Q6P1W5 598 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CD300LDQ6UXZ3 194 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMPRSS11FQ6ZWK6 438 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MBOAT2Q6ZWT7 520 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TRILQ7L0X0 811 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 HIPK1Q86Z02 1210 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CADM2Q8N3J6 435 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SVOPLQ8N434 492 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR5K1Q8NHB7 308 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR14L1PQ8NHC6 308 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FAR1Q8WVX9 515 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM239Q8WW34 195 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MDFIQ99750 246 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MEPEQ9NQ76 525 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 VNN3Q9NY84 501 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RHCGQ9UBD6 479 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DKKL1Q9UK85 242 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 HDGFL3Q9Y3E1 203 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TESMINQ9Y4I5 508 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 KLF2Q9Y5W3 355 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SPIN1Q9Y657 262 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TRGV5A0A0B4J1U4 118 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TRBV4-1A0A0J9YWV2 114 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM72A0PK05 275 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ELOA3DA6NLF2 546 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GJE1A6NN92 205 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FAM166BA8MTA8 275 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GNGT2O14610 69 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 KLF4O43474 513 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DNPH1O43598 174 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR2T1O43869 369 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TRAPPC6AO75865 159 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CELA3AP09093 270 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PEPDP12955 493 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF708P17019 499 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 BMP7P18075 431 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RFC3P40938 356 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OMPP47874 163 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 LHX2P50458 406 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ARHGDIAP52565 204 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PER3P56645 1201 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SPIBQ01892 262 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SLC34A1Q06495 639 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RCN1Q15293 331 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SEC23BQ15437 767 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ELOA3BQ3SY89 546 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ANKDD1AQ495B1 522 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SYT14P1Q58G82 188 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 WIPI1Q5MNZ9 446 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM179BQ7Z7N9 219 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 AMIGO2Q86SJ2 522 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 YRDCQ86U90 279 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ELOA3Q8NG57 546 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MFSD8Q8NHS3 518 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM255BQ8WV15 326 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DDIT4LQ96D03 193 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ADGRG7Q96K78 797 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GPR137Q96N19 417 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SLX1AQ9BQ83 275 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DGCR6LQ9BY27 220 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 KLHL4Q9C0H6 718 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GABARAPL1Q9H0R8 117 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FANCFQ9NPI8 374 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 C8orf4Q9NR00 106 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMCC3Q9ULS5 477 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SAMHD1Q9Y3Z3 626 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FREM3P0C091 2139 aa10.01□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ACANP16112 2415 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TRAV36DV7A0A075B6V5 113 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FTCDNL1E5RQL4 147 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 G3V2T6 193 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TFECO14948 347 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GMFGO60234 142 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ATP6V1G2O95670 118 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PMS2P2O95744 297 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MT-ATP6P00846 226 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ANXA8P13928 327 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CD99P14209 185 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 IL11P20809 199 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CBLP22681 906 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 IFNGR2P38484 337 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TDGF1P3P51864 188 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CLDN15P56746 228 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 H3F3AP84243 136 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PMP22Q01453 160 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CRYZQ08257 329 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 COX10Q12887 443 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MFSD13AQ14CX5 517 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 EXOC3L2Q2M3D2 409 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CTU2Q2VPK5 515 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms