RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CCNYQ8ND76 341 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 RAB3IL1Q8TBN0 382 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 MITD1Q8WV92 249 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 P3H4Q92791 437 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 BADQ92934 168 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 SLC41A3Q96GZ6 507 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 KCNS3Q9BQ31 491 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 GPR174Q9BXC1 333 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 ATG10Q9H0Y0 220 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 METTL7AQ9H8H3 244 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 NRN1Q9NPD7 142 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 SLC39A1Q9NY26 324 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 LRRC37AA6NMS7 1700 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 COL4A5P29400 1685 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 A0A0J9YYE9 177 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 K7EQM0 130 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 RRP8O43159 456 aaKnown RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 DEXIO95424 95 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 TRBC1P01850 177 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 MMP1P03956 469 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 PGK2P07205 417 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SERPINF2P08697 491 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SNRPCP09234 159 aaKnown RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 IQCF3P0C7M6 154 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 CALM1P0DP23 149 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 CALM2P0DP24 149 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 CALM3P0DP25 149 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 CALCBP10092 127 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZNF19P17023 458 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 RRM2P31350 389 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 EVI2BP34910 448 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ACADSBP45954 432 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 RWDD2BP57060 319 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ARPC4P59998 168 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 MYL6P60660 151 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 TSPAN5P62079 268 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 PPIL2Q13356 520 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 XRCC4Q13426 336 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 TPD52L1Q16890 204 aaPredicted RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 MICAQ29983 383 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 HKDC1Q2TB90 917 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 BCL7AQ4VC05 210 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 TCHHL1Q5QJ38 904 aaPredicted RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 PTRHD1Q6GMV3 140 aaKnown RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 OR6B2Q6IFH4 312 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 PMF1Q6P1K2 205 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 KDM7AQ6ZMT4 941 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 PRSS48Q7RTY5 328 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SLC22A16Q86VW1 577 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZDHHC21Q8IVQ6 265 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 LINC00301Q8NCQ3 95 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 OR56B1Q8NGI3 324 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 OR2T3Q8NH03 318 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZNF414Q96IQ9 312 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZNF560Q96MR9 790 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SPATA13Q96N96 652 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZNF607Q96SK3 696 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 CYTH2Q99418 400 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 IMPAD1Q9NX62 359 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SENP1Q9P0U3 644 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 SLC9A8Q9Y2E8 581 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 ZNF256Q9Y2P7 627 aaPredicted RBP3.78□□□□□ -1.8
NUP88-213ENST00000576862 KLHDC2Q9Y2U9 406 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 MFHAS1Q9Y4C4 1052 aa3.78□□□□□ -1.8
NUP88-213ENST00000576862 MYH3P11055 1940 aa3.78□□□□□ -1.81
NUP88-213ENST00000576862 PLIN4Q96Q06 1357 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 DOCK2Q92608 1830 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 RGPD3A6NKT7 1758 aaPredicted RBP3.77□□□□□ -1.81
NUP88-213ENST00000576862 RGPD4Q7Z3J3 1758 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 IGHV3-35A0A0C4DH35 117 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 FAM240BA0A1B0GVZ2 78 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 OR52A4PA6NMU1 304 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 PSMD11O00231 422 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 XPO1O14980 1071 aaKnown RBP3.77□□□□□ -1.81
NUP88-213ENST00000576862 CHADO15335 359 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 HDAC3O15379 428 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 CYTH3O43739 400 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 HSF2BPO75031 334 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 OR5F1O95221 314 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 NUDT14O95848 222 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 TGM6O95932 706 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 SERPINA3P01011 423 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 GOLGA8HP0CJ92 632 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 LAMP1P11279 417 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 FUT1P19526 365 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 CYP2B6P20813 491 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 GDF1P27539 372 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 FNTAP49354 379 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 SLC7A2P52569 658 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 CRYBB1P53674 252 aaPredicted RBP3.77□□□□□ -1.81
NUP88-213ENST00000576862 MTTPP55157 894 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 CLDN8P56748 225 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 LYZP61626 148 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 TCP10Q12799 353 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 STK38Q15208 465 aa3.77□□□□□ -1.81
NUP88-213ENST00000576862 CD226Q15762 336 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms