RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FLNBO75369 2602 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 UNC79Q9P2D8 2635 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 IGKV1D-42A0A075B6H8 117 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 A0A087WZY1 265 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TMED7-TICAM2A0A0A6YYA0 188 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 A0A1B0GUH1 482 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 A0A1B0GWA3 101 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 MAGEA13PA6NCF6 341 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 WIPF3A6NGB9 483 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TRIM64A6NGJ6 449 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 A6NHS1 94 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 SAC3D1A6NKF1 404 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 CPSF4LA6NMK7 179 aaKnown RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 FAM47E-STBD1D6RA91 191 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 LRRN3E7EW58 273 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 E9PLN8 166 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 E9PQ18 207 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 J3KTA2 159 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 PDLIM1O00151 329 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ETV2O00321 342 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 EI24O14681 340 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 LYPD3O95274 346 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 MT-ND1P03886 318 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ALPLP05186 524 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 LYNP07948 512 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 IMPDH2P12268 514 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 GP1BBP13224 206 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ETS2P15036 469 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 CPN1P15169 458 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 PGCP20142 388 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 CBLP22681 906 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 PRKAR1BP31321 381 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 YAP1P46937 504 aaKnown RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 KCNJ5P48544 419 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 RGS8P57771 180 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 SELENOWP63302 87 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 LSM11P83369 360 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 SELENBP1Q13228 472 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 MED21Q13503 144 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 DAG1Q14118 895 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 LARS2Q15031 903 aaKnown RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 NRF1Q16656 503 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TMEM176BQ3YBM2 270 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 CYBRD1Q53TN4 286 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 PRAMEF8Q5VWM4 474 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 PRAMEF7Q5VXH5 474 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 VWA1Q6PCB0 445 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TBPL2Q6SJ96 375 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 USP51Q70EK9 711 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 MEX3DQ86XN8 651 aaKnown RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ADGRG3Q86Y34 549 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 SVOPLQ8N434 492 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 GALNT4Q8N4A0 578 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 OR2V1Q8NHB1 315 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ABHD3Q8WU67 409 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 INTS12Q96CB8 462 aaKnown RBP7.08□□□□□ -1.28
CCDC40-215ENST00000576033 NRBF2Q96F24 287 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TPD52L3Q96J77 140 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 HSH2DQ96JZ2 352 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 RDH12Q96NR8 316 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 OR5B2Q96R09 309 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 OSBPL10Q9BXB5 764 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 Q9H521 79 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 BATF3Q9NR55 127 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 ACER3Q9NUN7 267 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 VNN3Q9NY84 501 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 TMED7Q9Y3B3 224 aa7.08□□□□□ -1.28
CCDC40-215ENST00000576033 MBD3L4A6NDZ8 208 aaPredicted RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 MBD3L3A6NE82 208 aaPredicted RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 MBD3L5A6NJ08 208 aaPredicted RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 SLC22A20A6NK97 555 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 H0YAE9 185 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 SMAD9O15198 467 aaKnown RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 WDR1O75083 606 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 SOX30O94993 753 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF682O95780 498 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 LGI1O95970 557 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 CST1P01037 141 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 FESP07332 822 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 TFPIP10646 304 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 BMP5P22003 454 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ENPP1P22413 925 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 MYF6P23409 242 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ELK4P28324 431 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ALDH3A2P51648 485 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 CASP6P55212 293 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 RAC1P63000 192 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ADARB1P78563 741 aaKnown RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 VLDLRP98155 873 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 EGR4Q05215 589 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 MYBPHQ13203 477 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 GNA13Q14344 377 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 PDK3Q15120 406 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 OR1Q1Q15612 314 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF239Q16600 458 aaKnown RBP7.07□□□□□ -1.28
CCDC40-215ENST00000576033 SLC36A3Q495N2 470 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 SYT14P1Q58G82 188 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 C6orf52Q5T4I8 152 aa7.07□□□□□ -1.28
CCDC40-215ENST00000576033 NSUN5P2Q63ZY6 315 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms