RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	ZNF208	O43345	1280 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	FRS3	O43559	492 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	LYZL6	O75951	148 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	PGM3	O95394	542 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	IGHV3-9	P01782	118 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	CALB2	P22676	271 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	IGHV1-2	P23083	117 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	PPIB	P23284	216 aa	Known RBP	12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	HTR3A	P46098	478 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	CLK1	P49759	484 aa	Known RBP	12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	FOXD4	Q12950	439 aa	Predicted RBP	12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	PDK3	Q15120	406 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	TAB1	Q15750	504 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	LIN52	Q52LA3	116 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	C6orf89	Q6UWU4	347 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507		Q6ZT83	130 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	SERPINA11	Q86U17	422 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	IGFBPL1	Q8WX77	278 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	PLPPR2	Q96GM1	343 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	CGREF1	Q99674	301 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	TMEM204	Q9BSN7	226 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	SPATA9	Q9BWV2	254 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	HDHD5	Q9BXW7	423 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	RAD21L1	Q9H4I0	556 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	UBTD1	Q9HAC8	227 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	BCL2L10	Q9HD36	194 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	DLL4	Q9NR61	685 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	CALML5	Q9NZT1	146 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	EDAR	Q9UNE0	448 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	TRAPPC4	Q9Y296	219 aa		12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	ANKRD17	O75179	2603 aa	Known RBP	12.53	□□□□□ -0.4
EDC4-210	ENST00000575507	EBAG9	O00559	213 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	AIM2	O14862	343 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	TPST1	O60507	370 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	THBS1	P07996	1170 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	ITGAD	Q13349	1161 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	GNA13	Q14344	377 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	P2RY6	Q15077	328 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	ADRM1	Q16186	407 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	GLIPR1L2	Q4G1C9	344 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	BEX5	Q5H9J7	111 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF311	Q5JNZ3	666 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	RNF220	Q5VTB9	566 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	GALNT5	Q7Z7M9	940 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	CADM2	Q8N3J6	435 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	STEAP2	Q8NFT2	490 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	NFKBID	Q8NI38	313 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	LRRC58	Q96CX6	371 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	SH3GL1	Q99961	368 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	HOPX	Q9BPY8	73 aa	Predicted RBP	12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	WFDC6	Q9BQY6	131 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	TACO1	Q9BSH4	297 aa	Known RBP	12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	PRR14	Q9BWN1	585 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	THUMPD1	Q9NXG2	353 aa	Known RBP	12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	NDE1	Q9NXR1	346 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	CORO2B	Q9UQ03	480 aa		12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	SPIN1	Q9Y657	262 aa	Predicted RBP	12.52	□□□□□ -0.41
EDC4-210	ENST00000575507	ATP5H	O75947	161 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	UBOX5	O94941	541 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ARAF	P10398	606 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	GPX2	P18283	190 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	FKBP2	P26885	142 aa	Known RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	NUDT2	P50583	147 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	SLC16A1	P53985	500 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	FADD	Q13158	208 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	CEACAM7	Q14002	265 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	SLC17A1	Q14916	467 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	RUNDC3A	Q59EK9	446 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ARPIN	Q7Z6K5	226 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF440	Q8IYI8	595 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF100	Q8IYN0	542 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	TMEM99	Q8N816	258 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZIC4	Q8N9L1	334 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	OR8J3	Q8NGG0	315 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	NEUROG1	Q92886	237 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	KISS1R	Q969F8	398 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	C3orf49	Q96BT1	292 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	DDIT4L	Q96D03	193 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ANKRD27	Q96NW4	1050 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	GSX1	Q9H4S2	264 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	BEX4	Q9NWD9	120 aa	Predicted RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF232	Q9UNY5	417 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	AP3M1	Q9Y2T2	418 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	NOSIP	Q9Y314	301 aa	Known RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	IFT52	Q9Y366	437 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	F8	P00451	2351 aa		12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	TEP1	Q99973	2627 aa	Known RBP	12.51	□□□□□ -0.41
EDC4-210	ENST00000575507	DPRX	A6NFQ7	191 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	LIPT2	A6NK58	231 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	EVPLL	A8MZ36	301 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	FXYD1	O00168	92 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	DNPH1	O43598	174 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	NPIPB7	O75200	414 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	AKR7A3	O95154	331 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	T-ENOL	P0DO92	83 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	COX5A	P20674	150 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms