RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TSPAN2O60636 221 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SERPINI2O75830 405 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 PDGFBP01127 241 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ABCD3P28288 659 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 HOXA6P31267 233 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 CAV3P56539 151 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 GPR50Q13585 617 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 HLA-BQ31612 363 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 GHDCQ8N2G8 530 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 OR5W2Q8NH69 310 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 AP3S1Q92572 193 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 PIGKQ92643 395 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 OMA1Q96E52 524 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 WDFY2Q96P53 400 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 NMNAT3Q96T66 252 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 TBL1XR1Q9BZK7 514 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ABCB9Q9NP78 766 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 NRIP3Q9NQ35 241 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SLC22A11Q9NSA0 550 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 POLHQ9Y253 713 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SIRT4Q9Y6E7 314 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
VPS33B-208ENST00000574755 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 HTR3EA5X5Y0 456 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 J3QLW9 94 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 TO15178 435 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 SNX4O95219 450 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 NUDT14O95848 222 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF19P17023 458 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ITPKBP27987 946 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 TACR3P29371 465 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 LCN1P31025 176 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 SLC6A8P48029 635 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ERVK-25P63136 954 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 CCL7P80098 99 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF85Q03923 595 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF74Q16587 644 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 RABEPKQ7Z6M1 372 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 MARCH3Q86UD3 253 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 DEFB123Q8N688 67 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 SLC38A9Q8NBW4 561 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 PLPP5Q8NEB5 264 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF524Q96C55 264 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 RASD2Q96D21 266 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 MOGAT1Q96PD6 335 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 DEPDC7Q96QD5 511 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 CCDC32Q9BV29 185 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 SP140LQ9H930 580 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 FRYLO94915 3013 aa12.82□□□□□ -0.36
VPS33B-208ENST00000574755 IGHV3-20A0A0C4DH32 117 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 LY6G6EA0A0G2JKS1 128 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 ARPC3O15145 178 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 EGR4Q05215 589 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 DDI2Q5TDH0 399 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 MOSPD2Q8NHP6 518 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-208ENST00000574755 HTRA1Q92743 480 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 SDHCQ99643 169 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-208ENST00000574755 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 KCNN2Q9H2S1 579 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 MMP25Q9NPA2 562 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 C14orf119Q9NWQ9 140 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 ZMIZ1Q9ULJ6 1067 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 U3KQA8 63 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 V9GYH0 126 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 ADAMTS9Q9P2N4 1935 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 E9PI62 339 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 SCRG1O75711 98 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 RGS9O75916 674 aaPredicted RBP12.81□□□□□ -0.36
VPS33B-208ENST00000574755 TIAF1O95411 115 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 IGF2P01344 180 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 CFIP05156 583 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 GALP22466 123 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 AQP2P41181 271 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 OR12D2P58182 307 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 PON3Q15166 354 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 LCN1P1Q5VSP4 162 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 ARL9Q6T311 187 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 TMEM91Q6ZNR0 172 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 WDR5BQ86VZ2 330 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 NPEPL1Q8NDH3 523 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 OR4D9Q8NGE8 314 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 CNN2Q99439 309 aaKnown RBP12.81□□□□□ -0.36
VPS33B-208ENST00000574755 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 HIF3AQ9Y2N7 669 aa12.81□□□□□ -0.36
VPS33B-208ENST00000574755 TEX13CA0A0J9YWL9 993 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 IGHV5-10-1A0A0J9YXX1 117 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SLC35F4A4IF30 521 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms