RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 DDIT4LQ96D03 193 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 SPDL1Q96EA4 605 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 ZHX1-C8orf76Q96EF9 292 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 C18orf12Q96KH6 178 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 CCDC28BQ9BUN5 200 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 ADPRHL2Q9NX46 363 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 EMC3Q9P0I2 261 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 VAPAQ9P0L0 249 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 TRAPPC4Q9Y296 219 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 FLVCR1Q9Y5Y0 555 aa9.98□□□□□ -0.81
RPAIN-214ENST00000574003 NIPBLQ6KC79 2804 aaeCLIP9.98□□□□□ -0.81
RPAIN-214ENST00000574003 A0A0G2JPF8 293 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CIB4A0PJX0 185 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 LIPT2A6NK58 231 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CCT8L1PA6NM43 557 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 HNRNPCL2B2RXH8 293 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 HNRNPCL3B7ZW38 293 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 FAAHO00519 579 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ARHGEF9O43307 516 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZNF208O43345 1280 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 TPST1O60507 370 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 HNRNPCL1O60812 293 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 MRPL33O75394 65 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 LY6G6DO95868 133 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 HNRNPCL4P0DMR1 293 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 FOSL1P15407 271 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 NCF2P19878 526 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CXCR1P25024 350 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 IDUAP35475 653 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CDKN1AP38936 164 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 MAGEA8P43361 318 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CLK1P49759 484 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZNF83P51522 516 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ATP5J2P56134 94 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 SLC25A3Q00325 362 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 SF3A3Q12874 501 aaKnown RBP eCLIP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 LARS2Q15031 903 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 OTUD3Q5T2D3 398 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 TSPO2Q5TGU0 170 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 KDM8Q8N371 416 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 GOLGA6L1Q8N7Z2 621 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZNF611Q8N823 705 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZIC4Q8N9L1 334 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 TMEM171Q8WVE6 324 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 C3orf49Q96BT1 292 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZNF385AQ96PM9 386 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 WFDC6Q9BQY6 131 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ESRP2Q9H6T0 727 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 A4GALTQ9NPC4 353 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 SLC7A10Q9NS82 523 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 INTS9Q9NV88 658 aaKnown RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 SEC14L4Q9UDX3 406 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 MAGED1Q9Y5V3 778 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-214ENST00000574003 ZANQ9Y493 2812 aa9.97□□□□□ -0.81
RPAIN-214ENST00000574003 TRBV5-3A0A0A0MS03 114 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 OR5H1A6NKK0 313 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 SHISA9B4DS77 424 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 ABCD4O14678 606 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 NDUFS7O75251 213 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 SASH3O75995 380 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 PGM3O95394 542 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 TGDSO95455 350 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 THBS1P07996 1170 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 BMP2P12643 396 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 CDH2P19022 906 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-214ENST00000574003 HTR2AP28223 471 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 AQP1P29972 269 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 MRPL19P49406 292 aaKnown RBP9.96□□□□□ -0.82
RPAIN-214ENST00000574003 P2RY4P51582 365 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 COPZ1P61923 177 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 LTBQ06643 244 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 SELPLGQ14242 412 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 SLC17A1Q14916 467 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 PGGHGQ32M88 737 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 ZNF672Q499Z4 452 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-214ENST00000574003 LRIF1Q5T3J3 769 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 GCNT6Q5T4J0 391 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 RNF220Q5VTB9 566 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 WBP2NLQ6ICG8 309 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 PAQR6Q6TCH4 344 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 CLEC9AQ6UXN8 241 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 GPAT4Q86UL3 456 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 WDR31Q8NA23 367 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 MAPK1IP1LQ8NDC0 245 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 OR9K2Q8NGE7 335 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 CKAP2Q8WWK9 683 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 PMM1Q92871 262 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 SLC25A36Q96CQ1 311 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 NAA11Q9BSU3 229 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-214ENST00000574003 GSX2Q9BZM3 304 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 TRIM2Q9C040 744 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 BCL2L10Q9HD36 194 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 ASB6Q9NWX5 421 aa9.96□□□□□ -0.82
RPAIN-214ENST00000574003 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-214ENST00000574003 ZNF232Q9UNY5 417 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms