RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 UGT2B17O75795 530 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ATP5LO75964 103 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 AP2A1O95782 977 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 TSPAN13O95857 204 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 DHFRP00374 187 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 APOEP02649 317 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 WNT1P04628 370 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CHRNB1P11230 501 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 DPEP1P16444 411 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 HLA-GP17693 338 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CR2P20023 1033 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CBLP22681 906 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 GCAP28676 217 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ARR3P36575 388 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 TGFBR2P37173 567 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 NSG1P42857 185 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 RANBP1P43487 201 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 GNPDA1P46926 289 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 PRLHRP49683 370 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 TMED10P49755 219 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CDK9P50750 372 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 VLDLRP98155 873 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ST3GAL3Q11203 375 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 STX4Q12846 297 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CTTNQ14247 550 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 EMC2Q15006 297 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF74Q16587 644 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CHRFAM7AQ494W8 412 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF672Q499Z4 452 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZCWPW2Q504Y3 356 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 PHLDA2Q53GA4 152 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 DMRTC1Q5HYR2 192 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 C1QL3Q5VWW1 255 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 LPCAT4Q643R3 524 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 TCEAL6Q6IPX3 200 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 FAHD1Q6P587 224 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 C3P1Q6ZMU1 363 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CCDC121Q6ZUS5 278 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 USP43Q70EL4 1123 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 AHSA2Q719I0 299 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 HIPK1Q86Z02 1210 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 TMEM139Q8IV31 216 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 LRTM2Q8N967 370 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ACBD4Q8NC06 268 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 OR56A4Q8NGH8 313 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2Y1Q8NGV0 311 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 OR10Z1Q8NGY1 313 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 LZICQ8WZA0 190 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CXorf40BQ96DE9 158 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CENPNQ96H22 339 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 NOL4LQ96MY1 436 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF641Q96N77 438 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CLCC1Q96S66 551 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 CDCA3Q99618 268 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 NIPSNAP3BQ9BS92 247 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 RPP25Q9BUL9 199 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 POLDIP3Q9BY77 421 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZYG11BQ9C0D3 744 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 MMP28Q9H239 520 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ALG9Q9H6U8 611 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 S100A14Q9HCY8 104 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 SIGLEC8Q9NYZ4 499 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 OPN4Q9UHM6 478 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 PURGQ9UJV8 347 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 LAMP3Q9UQV4 416 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC17A4Q9Y2C5 497 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 MMACHCQ9Y4U1 282 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 DCAF1Q9Y4B6 1507 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ROCK2O75116 1388 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 EIF3AQ14152 1382 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 NPIPA5A0A0B4J1W7 369 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC5A10A0PJK1 596 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 GAGE12BA1L429 117 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 GAGE12HA6NDE8 117 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 C2orf74A8MZ97 194 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 E5RJQ4 531 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 NPIPA5E9PKD4 350 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 LMO7DNF2Z398 122 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 G3V3Y1 287 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 G3V4G9 280 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 OVOL3O00110 214 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SULT1C2O00338 296 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF195O14628 629 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 NUAK1O60285 661 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 TOXO94900 526 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CA1P00915 261 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 IGLV1-40P01703 118 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SERPINA5P05154 406 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 RHOCP08134 193 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 GP1BBP13224 206 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ME2P23368 584 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 FASP25445 335 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 HOXA7P31268 230 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 FOXN2P32314 431 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 GRIA3P42263 894 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CSNK1A1P48729 337 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PGFP49763 221 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms