RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 PRRG4Q9BZD6 226 aa13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 GMPR2Q9P2T1 348 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 CLEC4AQ9UMR7 237 aa13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 VDAC3Q9Y277 283 aa13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 EMC9Q9Y3B6 208 aa13.21□□□□□ -0.29
NPLOC4-207ENST00000572346 CLDN24A6NM45 220 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 CXCR6O00574 342 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 OIP5O43482 229 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 OPN1SWP03999 348 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 PPP3CBP16298 524 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 ZNF17P17021 662 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 RYKP34925 604 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 PGM1P36871 562 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 SUMO3P55854 103 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 PCBP3P57721 371 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 BNIP1Q12981 228 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 CBFBQ13951 182 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 DNAL1Q4LDG9 190 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 LRRC23Q53EV4 343 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 CBLN3Q6UW01 205 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 C6orf89Q6UWU4 347 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 STAC2Q6ZMT1 411 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 OR10D3Q8NH80 312 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 NPAS1Q99742 590 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 C1orf21Q9H246 121 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 TAS2R1Q9NYW7 299 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 STOML1Q9UBI4 398 aa13.2□□□□□ -0.3
NPLOC4-207ENST00000572346 SS18L1O75177 396 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 MFN2O95140 757 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 PLAUP00749 431 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 UQCRBP14927 111 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 IL11P20809 199 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 PRKAR1BP31321 381 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 KDELR2P33947 212 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 CTBP2P56545 445 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 CTU2Q2VPK5 515 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 ZNF704Q6ZNC4 412 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 CCDC121Q6ZUS5 278 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 CCDC80Q76M96 950 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 ZNF440Q8IYI8 595 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 SMYD1Q8NB12 490 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 OR5W2Q8NH69 310 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 MDFIQ99750 246 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 PRPF19Q9UMS4 504 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-207ENST00000572346 A0A087WZY1 265 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 CDHR4A6H8M9 788 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 INAFM1C9JVW0 142 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 HSD17B1P14061 328 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 PAX1P15863 534 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 PGCP20142 388 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 DMTNQ08495 405 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 SKP2Q13309 424 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 GTPBP8Q8N3Z3 284 aaPredicted RBP13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 ZNF701Q9NV72 531 aaPredicted RBP13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 PAQR5Q9NXK6 330 aaPredicted RBP13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 MCTS1Q9ULC4 181 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 ICAM5Q9UMF0 924 aa13.18□□□□□ -0.3
NPLOC4-207ENST00000572346 CFAP73A6NFT4 308 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 ADAMDEC1O15204 470 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 CXCL13O43927 109 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 TPST1O60507 370 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 BCAS1O75363 584 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 STAMBPO95630 424 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 OPN1LWP04000 364 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 NCK1P16333 377 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 ME2P23368 584 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 PSMA4P25789 261 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 NR1H2P55055 460 aa13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-207ENST00000572346 COPZ1P61923 177 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms