RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CR1LQ2VPA4 569 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 TYW3Q6IPR3 259 aaKnown RBP16.57■□□□□ 0.24
SCARF1-204ENST00000570902 ARFGAP2Q8N6H7 521 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 MIPOL1Q8TD10 442 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 PMM1Q92871 262 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 BOD1Q96IK1 185 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 OR51I1Q9H343 314 aa16.57■□□□□ 0.24
SCARF1-204ENST00000570902 FBXO9Q9UK97 447 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-204ENST00000570902 B9A039 149 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 ZNF208O43345 1280 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 PDE5AO76074 875 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 BPGMP07738 259 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 CCNA2P20248 432 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 MAP2K6P52564 334 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 SLC17A1Q14916 467 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 PGS1Q32NB8 556 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 AP1ARQ63HQ0 302 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 OLIG3Q7RTU3 272 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 ABHD12BQ7Z5M8 362 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-204ENST00000570902 POMGNT2Q8NAT1 580 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 TMEM45BQ96B21 275 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 PKNOX2Q96KN3 472 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 BPESC1Q9GZL8 116 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 CA10Q9NS85 328 aa16.56■□□□□ 0.24
SCARF1-204ENST00000570902 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-204ENST00000570902 TMED7-TICAM2A0A0A6YYA0 188 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 BCAS1O75363 584 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-204ENST00000570902 CRYAAP02489 173 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 ETV4P43268 484 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 IDH2P48735 452 aaKnown RBP16.55■□□□□ 0.24
SCARF1-204ENST00000570902 POLR2HP52434 150 aaKnown RBP16.55■□□□□ 0.24
SCARF1-204ENST00000570902 KCNJ10P78508 379 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 MAD2L1Q13257 205 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-204ENST00000570902 PAQR6Q6TCH4 344 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 SPATA19Q7Z5L4 167 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 NUDCD3Q8IVD9 361 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 CLECL1Q8IZS7 167 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 CLEC4FQ8N1N0 589 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 ANKS4BQ8N8V4 417 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 XAGE5Q8WWM1 108 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 C3orf30Q96M34 536 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 SLC38A2Q96QD8 506 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 KATNB1Q9BVA0 655 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 SAP130Q9H0E3 1048 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 RAB1BQ9H0U4 201 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 TMED7Q9Y3B3 224 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 ARFGEF3Q5TH69 2177 aa16.55■□□□□ 0.24
SCARF1-204ENST00000570902 NUP214P35658 2090 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-204ENST00000570902 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 RNASET2O00584 256 aaKnown RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 ERLIN1O75477 346 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 ERCC1P07992 297 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 OR12D1P0DN82 309 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 G6PDP11413 515 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 IMPDH2P12268 514 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 CDH2P19022 906 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 ARRB2P32121 409 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 PPOXP50336 477 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 CLDN8P56748 225 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 HPCAP84074 193 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 RUNX1T1Q06455 604 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 EFNB3Q15768 340 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 HIKESHIQ53FT3 197 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 MEX3DQ86XN8 651 aaKnown RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 OR4A15Q8NGL6 344 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 HPS1Q92902 700 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 ROPN1LQ96C74 230 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 TUBGCP3Q96CW5 907 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 SF3B5Q9BWJ5 86 aaKnown RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 PIF1Q9H611 641 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 MOV10Q9HCE1 1003 aaKnown RBP16.54■□□□□ 0.24
SCARF1-204ENST00000570902 TMEM45AQ9NWC5 275 aa16.54■□□□□ 0.24
SCARF1-204ENST00000570902 KLF11O14901 512 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 KRT33AO76009 404 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 SERPINB5P36952 375 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 SRP14P37108 136 aaKnown RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 IDH3GP51553 393 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 CHN2P52757 468 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 ADIPOQQ15848 244 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 TNFAIP8L3Q5GJ75 292 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 BEND6Q5SZJ8 279 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 OTUD3Q5T2D3 398 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 OR4F3Q6IEY1 312 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 TNFAIP8L2Q6P589 184 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 FRRS1Q6ZNA5 592 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 AAED1Q7RTV5 226 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 CROCCP2Q86T23 111 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 CMIPQ8IY22 773 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 OR9K2Q8NGE7 335 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 PLK3Q9H4B4 646 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 KCNK9Q9NPC2 374 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 NOP53Q9NZM5 478 aaKnown RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 ZDHHC2Q9UIJ5 367 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 TMEFF2Q9UIK5 374 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-204ENST00000570902 OSGIN1Q9UJX0 560 aa16.53■□□□□ 0.24
SCARF1-204ENST00000570902 TMEM72A0PK05 275 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 STAMBPO95630 424 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms