RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	C20orf85	Q9H1P6	137 aa		11.07	□□□□□ -0.64
SPG7-222	ENST00000569820	EGLN3	Q9H6Z9	239 aa		11.07	□□□□□ -0.64
SPG7-222	ENST00000569820	CXorf36	Q9H7Y0	433 aa		11.07	□□□□□ -0.64
SPG7-222	ENST00000569820	ING1	Q9UK53	422 aa	Predicted RBP	11.07	□□□□□ -0.64
SPG7-222	ENST00000569820	KDM4E	B2RXH2	506 aa	Predicted RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	ERI3	O43414	337 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	S100A8	P05109	93 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	S100A9	P06702	114 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	POU3F2	P20265	443 aa	Predicted RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	PCBP4	P57723	403 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	TRA2B	P62995	288 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	MAP4K2	Q12851	820 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SFXN4	Q6P4A7	337 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	ABHD17C	Q6PCB6	329 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	ALKAL2	Q6UX46	152 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SLITRK4	Q8IW52	837 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	OR2L5	Q8NG80	312 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	RFK	Q969G6	155 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	TMEM68	Q96MH6	324 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	GPA33	Q99795	319 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	WFDC6	Q9BQY6	131 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	C7orf50	Q9BRJ6	194 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	FNDC11	Q9BVV2	318 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	FOXQ1	Q9C009	403 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	A4GALT	Q9NPC4	353 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	EQTN	Q9NQ60	294 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	PRDM7	Q9NQW5	492 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	NKIRAS2	Q9NYR9	191 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	RPS6KB2	Q9UBS0	482 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	FBXL2	Q9UKC9	423 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	A4GNT	Q9UNA3	340 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	TDRD6	O60522	2096 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	PLSCR5	A0PG75	271 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	RNF13	O43567	381 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	APOC3	P02656	99 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	UQCRC2	P22695	453 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	KCNJ5	P48544	419 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	MAZ	P56270	477 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	UBE2I	P63279	158 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	DGCR2	P98153	550 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	DHODH	Q02127	395 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SNTB2	Q13425	540 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	KIR2DS3	Q14952	304 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	UBXN2B	Q14CS0	331 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SLC22A10	Q63ZE4	541 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	VN1R4	Q7Z5H5	301 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	CMIP	Q8IY22	773 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	LINC00471	Q8N535	108 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	HORMAD2	Q8N7B1	307 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SCARB1	Q8WTV0	552 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SLC22A18	Q96BI1	424 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	ZFP3	Q96NJ6	502 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	FCRL4	Q96PJ5	515 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	PTDSS2	Q9BVG9	487 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SPATA5L1	Q9BVQ7	753 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	PAPOLG	Q9BWT3	736 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	GSDMC	Q9BYG8	508 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	SEC14L3	Q9UDX4	400 aa		11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	APOBEC3B	Q9UH17	382 aa	Known RBP	11.06	□□□□□ -0.64
SPG7-222	ENST00000569820	GOLGA4	Q13439	2230 aa	Known RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820		A0A0G2JPF8	293 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	C2orf74	A8MZ97	194 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	HNRNPCL3	B7ZW38	293 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	TEX46	H3BTG2	121 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ZNF217	O75362	1048 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	UBXN7	O94888	489 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	CBX7	O95931	251 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	IGHV2-70	P01814	119 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ADRB1	P08588	477 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ACAA1	P09110	424 aa	Predicted RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	HNRNPCL4	P0DMR1	293 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	GSTM3	P21266	225 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	HIST1H1T	P22492	207 aa	Predicted RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ATP6V1E1	P36543	226 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	MMP15	P51511	669 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	LSM11	P83369	360 aa	Known RBP eCLIP	11.05	□□□□□ -0.64	5e-8	■□□□□ 10.3
SPG7-222	ENST00000569820	SHC2	P98077	582 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ENTPD8	Q5MY95	495 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	MRM1	Q6IN84	353 aa	Known RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	C1orf94	Q6P1W5	598 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	SMARCD3	Q6STE5	483 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	ATRAID	Q6UW56	229 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	SEZ6L2	Q6UXD5	910 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	MCAT	Q8IVS2	390 aa	Known RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	SFT2D1	Q8WV19	159 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	OR5P2	Q8WZ92	322 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	GTF3A	Q92664	365 aa	Known RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	EXOSC8	Q96B26	276 aa	Known RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	POT1	Q9NUX5	634 aa		11.05	□□□□□ -0.64
SPG7-222	ENST00000569820	SLC9B1P1	A6NJY1	282 aa		11.04	□□□□□ -0.64
SPG7-222	ENST00000569820	EFCAB7	A8K855	629 aa		11.04	□□□□□ -0.64
SPG7-222	ENST00000569820	PRR23D1	E9PI22	279 aa	Predicted RBP	11.04	□□□□□ -0.64
SPG7-222	ENST00000569820		M0R3H8	397 aa		11.04	□□□□□ -0.64
SPG7-222	ENST00000569820	PRAF2	O60831	178 aa		11.04	□□□□□ -0.64
SPG7-222	ENST00000569820	PRKRA	O75569	313 aa	Known RBP	11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms