RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PDCD6IPQ8WUM4 868 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 PHLDA1Q8WV24 401 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GIMAP1Q8WWP7 306 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 TPD52L3Q96J77 140 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GSDMAQ96QA5 445 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ATOH8Q96SQ7 321 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 IL12RB2Q99665 862 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 AGPAT1Q99943 283 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GSDMCQ9BYG8 508 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 MAGT1Q9H0U3 335 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GANQ9H2C0 597 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DPEP2Q9H4A9 486 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 MARCH7Q9H992 704 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 KCNK13Q9HB14 408 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 RDH14Q9HBH5 336 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 AGPAT3Q9NRZ7 376 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 RAB20Q9NX57 234 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 NLGN3Q9NZ94 848 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 LHX3Q9UBR4 397 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC12A6Q9UHW9 1150 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 B9D1Q9UPM9 204 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 EXOGQ9Y2C4 368 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 AP4B1Q9Y6B7 739 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 RNF215Q9Y6U7 377 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CELSR2Q9HCU4 2923 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DOCK4Q8N1I0 1966 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 KNTC1P50748 2209 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 UNC13CQ8NB66 2214 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 PTPN13Q12923 2485 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LRBAP50851 2863 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRBV5-5A0A0J9YX44 114 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SH3PXD2BA1X283 911 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 VPS37CA5D8V6 355 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SERINC4A6NH21 518 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 C10orf142B7Z368 130 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 DNALI1O14645 258 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CHEK1O14757 476 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 KLF11O14901 512 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 AQP9O43315 295 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 BUB1O43683 1085 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 MAGEC1O60732 1142 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 DFFBO76075 338 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SORBS2O94875 1100 aaKnown RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 DUS4LO95620 317 aaKnown RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CLDN1O95832 211 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TXNDC12O95881 172 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 HPRP00739 348 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 FGF4P08620 206 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LIPCP11150 499 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANXA8P13928 327 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TSPAN8P19075 237 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 UQCRC2P22695 453 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CA6P23280 308 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CHI3L1P36222 383 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRIM23P36406 574 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LONP1P36776 959 aaKnown RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 GCLMP48507 274 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LIMK2P53671 638 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CBX1P83916 185 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 NME3Q13232 169 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 NFATC2Q13469 925 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 GPR50Q13585 617 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CEACAM7Q14002 265 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 OPCMLQ14982 345 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 C16orf72Q14CZ0 275 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 PDK3Q15120 406 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 P2RY14Q15391 338 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CAMK4Q16566 473 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZSWIM7Q19AV6 140 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SGSM1Q2NKQ1 1148 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 GOLGA7BQ2TAP0 167 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 DEFB109BQ30KR1 87 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 PHYHD1Q5SRE7 291 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 C1orf220Q5T0J3 134 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 PIP5KL1Q5T9C9 394 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANXA8L1Q5VT79 327 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 PRAMEF20Q5VT98 475 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TAF3Q5VWG9 929 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SYPL2Q5VXT5 272 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 KCTD16Q68DU8 428 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 HIST2H2AA3Q6FI13 130 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CAPN13Q6MZZ7 669 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 METAP1DQ6UB28 335 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM64Q6YI46 380 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LEKR1Q6ZMV7 388 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM135Q86UB9 458 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC22A16Q86VW1 577 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 LACC1Q8IV20 430 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 CCDC65Q8IXS2 484 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 RCOR2Q8IZ40 523 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 KIRREL3Q8IZU9 778 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF614Q8N883 585 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF321PQ8N8H1 164 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR6M1Q8NGM8 313 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR52N5Q8NH56 324 aa2.81□□□□□ -1.96
HMGB1P6-201ENST00000569046 GOLGA5Q8TBA6 731 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms