RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CCDC63Q8NA47 563 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 NUP37Q8NFH4 326 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 FAM216AQ8WUB2 273 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 WDR60Q8WVS4 1066 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 PMM1Q92871 262 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 DDIT4LQ96D03 193 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 PRPF18Q99633 342 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 SERHL2Q9H4I8 314 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 EXOSC3Q9NQT5 275 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 EXD2Q9NVH0 621 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 TMEM45AQ9NWC5 275 aa10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 CRNNQ9UBG3 495 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-209ENST00000568569 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 ZNF208O43345 1280 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 PLIN3O60664 434 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 BCAS1O75363 584 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 KRT33AO76009 404 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 CECR9P0C854 216 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 CPA3P15088 417 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 CCNA2P20248 432 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 MATN1P21941 496 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 HBA1P69905 142 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 PTGR1Q14914 329 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 MAPK14Q16539 360 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 ANKRD16Q6P6B7 361 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 SHQ1Q6PI26 577 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 OLIG3Q7RTU3 272 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 AAED1Q7RTV5 226 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 ARFGAP2Q8N6H7 521 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 OR1K1Q8NGR3 316 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 UBASH3BQ8TF42 649 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 MZB1Q8WU39 189 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 TWIST2Q8WVJ9 160 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 COQ8BQ96D53 544 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 PPP3R2Q96LZ3 170 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 ZNF385AQ96PM9 386 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 DOK1Q99704 481 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 SF3B5Q9BWJ5 86 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 DYNLRB1Q9NP97 96 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 TBK1Q9UHD2 729 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 WDR45Q9Y484 360 aa10.23□□□□□ -0.77
GTF3C1-209ENST00000568569 TMED7-TICAM2A0A0A6YYA0 188 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ARPC4-TTLL3A0A0A6YYG9 625 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 RNF103-CHMP3A0A140T963 221 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ZNF587BE7ETH6 402 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TRIM77I1YAP6 450 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 PIP5K1BO14986 540 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 RIPK2O43353 540 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 LGI1O95970 557 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 AGR2O95994 175 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 GUSBP08236 651 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 IMPDH2P12268 514 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 NPR2P20594 1047 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 PRPS1L1P21108 318 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 CALCRP30988 508 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 CCT5P48643 541 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 IDH2P48735 452 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 POLR2HP52434 150 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 MAP2K6P52564 334 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 HILS1P60008 231 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ADRM1Q16186 407 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 OTUD3Q5T2D3 398 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ATAD3BQ5T9A4 648 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 AP1ARQ63HQ0 302 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TYW3Q6IPR3 259 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 USP43Q70EL4 1123 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TRMT10CQ7L0Y3 403 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 C6orf120Q7Z4R8 191 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ZCCHC24Q8N2G6 241 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 SVOPLQ8N434 492 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 KRTCAP2Q8N6L1 136 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 FAM169BQ8N8A8 192 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ZIC4Q8N9L1 334 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 OR9K2Q8NGE7 335 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TMEM186Q96B77 213 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 AURKBQ96GD4 344 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 SLC35G5Q96KT7 338 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ANKRD27Q96NW4 1050 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 ALKBH3Q96Q83 286 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 RBM4Q9BWF3 364 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 PIF1Q9H611 641 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 POLE3Q9NRF9 147 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 PCDHB10Q9UN67 800 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TMED7Q9Y3B3 224 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 GRIP1Q9Y3R0 1128 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 SPEF1Q9Y4P9 236 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
GTF3C1-209ENST00000568569 A0A1W2PPM1 405 aa10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 TMEM72A0PK05 275 aa10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 SH3PXD2BA1X283 911 aa10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 TMEM233B4DJY2 109 aa10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 PEX11AO75192 247 aa10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 SKAP2O75563 359 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 RGS9O75916 674 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-209ENST00000568569 IGKV3-15P01624 115 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms