RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	POP5	Q969H6	163 aa	Known RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	GPR78	Q96P69	363 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	THUMPD3	Q9BV44	507 aa	Known RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	PLEK2	Q9NYT0	353 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	HDGFL3	Q9Y3E1	203 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	DTNA	Q9Y4J8	743 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737		A0A096LPK6	155 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	NR5A2	O00482	541 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	PDPK1	O15530	556 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	CYP7B1	O75881	506 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	LGI1	O95970	557 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	IGKV3-15	P01624	115 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	RPS17	P08708	135 aa	Known RBP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	RBP1	P09455	135 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	HMOX2	P30519	316 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	ALDH3B1	P43353	468 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	OR2B6	P58173	313 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	KRT80	Q6KB66	452 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	CDC73	Q6P1J9	531 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	C16orf87	Q6PH81	154 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	C3orf62	Q6ZUJ4	267 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	REC114	Q7Z4M0	266 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	OR4F5	Q8NH21	305 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	ZFP28	Q8NHY6	868 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF483	Q8TF39	744 aa	Predicted RBP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	AURKB	Q96GD4	344 aa	Predicted RBP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF48	Q96MX3	618 aa	Predicted RBP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	MRPL37	Q9BZE1	423 aa	Known RBP	11.79	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF225	Q9UK10	706 aa		11.79	□□□□□ -0.52
SMG1-213	ENST00000567737		A0A096LPE4	126 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737		A0A1W2PPZ6	126 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	CCDC151	A5D8V7	595 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	SLC22A31	A6NKX4	558 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF587B	E7ETH6	402 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	RP2	O75695	350 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	IGHV2-5	P01817	119 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	CELA3B	P08861	270 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	ASMT	P46597	345 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	SEC24C	P53992	1094 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	ATP12A	P54707	1039 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	RASA2	Q15283	850 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	OLFML2A	Q68BL7	652 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	ASPHD2	Q6ICH7	369 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	AAED1	Q7RTV5	226 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	MYPOP	Q86VE0	399 aa	Predicted RBP	11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	BCL6B	Q8N143	479 aa	Predicted RBP	11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	BCL2L2	Q92843	193 aa	Predicted RBP	11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	CDS1	Q92903	461 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	RAB8B	Q92930	207 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	TMEM45B	Q96B21	275 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	C16orf58	Q96GQ5	468 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	NAA11	Q9BSU3	229 aa	Predicted RBP	11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	TRIM31	Q9BZY9	425 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	SIRT5	Q9NXA8	310 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	CHRNA9	Q9UGM1	479 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	JRKL	Q9Y4A0	524 aa		11.78	□□□□□ -0.52
SMG1-213	ENST00000567737	TP73	O15350	636 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	EIF1B	O60739	113 aa	Known RBP	11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	CBR1	P16152	277 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	FKBP2	P26885	142 aa	Known RBP	11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	APOBEC1	P41238	236 aa	Known RBP	11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	RAD52	P43351	418 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	ATP4B	P51164	291 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	H3F3A	P84243	136 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	DR1	Q01658	176 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	NPRL3	Q12980	569 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	SLC17A1	Q14916	467 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	BEAN1	Q3B7T3	259 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	SPDYA	Q5MJ70	313 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	MROH9	Q5TGP6	573 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	SYT10	Q6XYQ8	523 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	RELL1	Q8IUW5	271 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	WDFY1	Q8IWB7	410 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	IL17RD	Q8NFM7	739 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	METTL6	Q8TCB7	284 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	STAC	Q99469	402 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	SYT3	Q9BQG1	590 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	VPS11	Q9H270	941 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	ZNF385D	Q9H6B1	395 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	NOX3	Q9HBY0	568 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	CRLF2	Q9HC73	371 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	DUSP22	Q9NRW4	184 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	ACER3	Q9NUN7	267 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	GRHL1	Q9NZI5	618 aa		11.77	□□□□□ -0.53
SMG1-213	ENST00000567737	ANKRD28	O15084	1053 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	NCR1	O76036	304 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	TSPAN15	O95858	294 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	CRYBA1	P05813	215 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	GSTA2	P09210	222 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	CLK1	P49759	484 aa	Known RBP	11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	HTR6	P50406	440 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	RAG2	P55895	527 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	SLC35A1	P78382	337 aa		11.76	□□□□□ -0.53
SMG1-213	ENST00000567737	LCN2	P80188	198 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms