RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLITRK4Q8IW52 837 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 LRRC17Q8N6Y2 441 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 TMEM52Q8NDY8 209 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 OR5J2Q8NH18 312 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 OR51A7Q8NH64 312 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 SLC37A2Q8TED4 501 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CNOT9Q92600 299 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 ANKRD9Q96BM1 317 aaPredicted RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 SPACA7Q96KW9 195 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 TNFRSF13CQ96RJ3 184 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 MED28Q9H204 178 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 RANBP3Q9H6Z4 567 aaPredicted RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 DNAJB12Q9NXW2 375 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 ING4Q9UNL4 249 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 MRPS2Q9Y399 296 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 SIT1Q9Y3P8 196 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 GXYLT2A0PJZ3 443 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 ZNF860A6NHJ4 632 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 ZNF749O43361 778 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 NDUFB2O95178 105 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CBX7O95931 251 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CT62P0C5K7 136 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 NME1P15531 152 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 STOMP27105 288 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 HSF2Q03933 536 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 LGALS3BPQ08380 585 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 EXOSC7Q15024 291 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 RPL22L1Q6P5R6 122 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 IL20RBQ6UXL0 311 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CMIPQ8IY22 773 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 PATE1Q8WXA2 126 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 YIPF5Q969M3 257 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CNN2Q99439 309 aaKnown RBP15.4■□□□□ 0.06
CMTM3-213ENST00000566756 LRRC61Q9BV99 259 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 CAMK2AQ9UQM7 478 aa15.4■□□□□ 0.06
CMTM3-213ENST00000566756 A0A0J9YY10 115 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 K7ESF4 209 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 FLRT2O43155 660 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 GPRIN2O60269 458 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 CELA2BP08218 269 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-213ENST00000566756 CLUP10909 449 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 EPXP11678 715 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ACVR1BP36896 505 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 RPL6Q02878 288 aaKnown RBP15.39■□□□□ 0.05
CMTM3-213ENST00000566756 DYRK1AQ13627 763 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ZNHIT3Q15649 155 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF141Q15928 474 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 SLC25A35Q3KQZ1 300 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ALG10BQ5I7T1 473 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 SLC35D3Q5M8T2 416 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ULK3Q6PHR2 472 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 GRHL3Q8TE85 626 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 ADAMTS14Q8WXS8 1223 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 THAP4Q8WY91 577 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 EMC3Q9P0I2 261 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 SPATA2Q9UM82 520 aa15.39■□□□□ 0.05
CMTM3-213ENST00000566756 LRRN3E7EW58 273 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ITGA10O75578 1167 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 TCRBP04435 133 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 TYRP1P17643 537 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 HTR2BP41595 481 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 GDI2P50395 445 aaKnown RBP15.38■□□□□ 0.05
CMTM3-213ENST00000566756 GPR143P51810 404 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PSMD4P55036 377 aaKnown RBP15.38■□□□□ 0.05
CMTM3-213ENST00000566756 IKZF1Q13422 519 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ELOCQ15369 112 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 CEP78Q5JTW2 689 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 SLC22A10Q63ZE4 541 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 UNQ9370/PRO34162Q6UXP9 181 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 C9orf62Q8N4C0 152 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 TOMM5Q8N4H5 51 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 AVL9Q8NBF6 648 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 OR10G6Q8NH81 332 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 OR14A16Q8NHC5 309 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 C1orf216Q8TAB5 229 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ZDHHC1Q8WTX9 485 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PELI1Q96FA3 418 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PEX11GQ96HA9 241 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ACTR6Q9GZN1 396 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 LRRN3Q9H3W5 708 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 KLHL1Q9NR64 748 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 TEKT2Q9UIF3 430 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 TP53BP1Q12888 1972 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ERVH48-1M5A8F1 160 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PPM1BO75688 479 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 SIRPAP78324 504 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PSG6Q00889 435 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 FGFBP1Q14512 234 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 BCL2L15Q5TBC7 163 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 SSX6Q7RTT6 188 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 PRSS41Q7RTY9 318 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ZAR1Q86SH2 424 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 SDR16C5Q8N3Y7 309 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 DEFB119Q8N690 84 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 CSNK1A1LQ8N752 337 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 CYB561A3Q8NBI2 242 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 OR52R1Q8NGF1 315 aa15.38■□□□□ 0.05
CMTM3-213ENST00000566756 ANGPTL6Q8NI99 470 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms