RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CHRM4P08173 479 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 ALDOCP09972 364 aaKnown RBP24.33■■□□□ 1.49
UBFD1-206ENST00000566669 NUDT6P53370 316 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 COPZ1P61923 177 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 PLAURQ03405 335 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 EPS8Q12929 822 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 LIN52Q52LA3 116 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 MUC15Q8N387 334 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 POMGNT2Q8NAT1 580 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 TEX37Q96LM6 180 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 PAIP2Q9BPZ3 127 aaKnown RBP24.33■■□□□ 1.49
UBFD1-206ENST00000566669 INPP5KQ9BT40 448 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 ADAM19Q9H013 955 aa24.33■■□□□ 1.49
UBFD1-206ENST00000566669 ADAM11O75078 769 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 WNT11O96014 354 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 ITGA5P08648 1049 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 CCNA2P20248 432 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 CXCR1P25024 350 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 ZNF83P51522 516 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 CRISP3P54108 245 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 MRPL2Q5T653 305 aaKnown RBP24.32■■□□□ 1.48
UBFD1-206ENST00000566669 ATG16L1Q676U5 607 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 CLEC2AQ6UVW9 174 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 MSANTD1Q6ZTZ1 278 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 SPATA3Q8NHX4 192 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 BOD1Q96IK1 185 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 OBP2BQ9NPH6 170 aa24.32■■□□□ 1.48
UBFD1-206ENST00000566669 A0A096LPI6 279 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 TMEM72A0PK05 275 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 CDHR4A6H8M9 788 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 TMEM247A6NEH6 219 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 OR6C65A6NJZ3 312 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 AP3D1O14617 1153 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 VAMP5O95183 116 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 IFNA2P01563 188 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 ZCCHC18P0CG32 403 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 MPGP29372 298 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 NME5P56597 212 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 CHRNB3Q05901 458 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 MPP2Q14168 576 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 RAB35Q15286 201 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 KLHL24Q6TFL4 600 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 CACNG6Q9BXT2 260 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 RMND5AQ9H871 391 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 MOV10Q9HCE1 1003 aaKnown RBP24.31■■□□□ 1.48
UBFD1-206ENST00000566669 RAB21Q9UL25 225 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 DNHD1Q96M86 4753 aa24.31■■□□□ 1.48
UBFD1-206ENST00000566669 E7EQL1 145 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 H7C417 338 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 M0R1B8 84 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 SSX4O60224 188 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 IMPDH2P12268 514 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 NTF4P34130 210 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 FABP6P51161 128 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 SLC18A1P54219 525 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 PRPS1P60891 318 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 LARS2Q15031 903 aaKnown RBP24.3■■□□□ 1.48
UBFD1-206ENST00000566669 PDCD4Q53EL6 469 aaKnown RBP24.3■■□□□ 1.48
UBFD1-206ENST00000566669 OTUD3Q5T2D3 398 aaPredicted RBP24.3■■□□□ 1.48
UBFD1-206ENST00000566669 WBP2NLQ6ICG8 309 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 C11orf71Q6IPW1 123 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 TAPBPLQ9BX59 468 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 SLC17A5Q9NRA2 495 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 GDF2Q9UK05 429 aaPredicted RBP24.3■■□□□ 1.48
UBFD1-206ENST00000566669 ZNF232Q9UNY5 417 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 DSPPQ9NZW4 1301 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 SONP18583 2426 aaKnown RBP24.3■■□□□ 1.48
UBFD1-206ENST00000566669 COL6A5A8TX70 2615 aa24.3■■□□□ 1.48
UBFD1-206ENST00000566669 PLCE1Q9P212 2302 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 SNNO75324 88 aaPredicted RBP24.29■■□□□ 1.48
UBFD1-206ENST00000566669 SLC22A3O75751 556 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 CSF3P09919 207 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 IL12AP29459 219 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 CDKN2CP42773 168 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 RNF220Q5VTB9 566 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 HMGN2P46Q86SG4 172 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 OR10H5Q8NGA6 315 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 OR52P1PQ8NH57 321 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 ZNF317Q96PQ6 595 aaPredicted RBP24.29■■□□□ 1.48
UBFD1-206ENST00000566669 SLC7A10Q9NS82 523 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 PMF1-BGLAPU3KQ54 211 aa24.29■■□□□ 1.48
UBFD1-206ENST00000566669 LIPT2A6NK58 231 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 AQP7P3A6NL99 342 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 A8MVM7 634 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 ANP32DO95626 131 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 SLC25A16P16260 332 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 EPHA3P29320 983 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 HIPK1Q86Z02 1210 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 MAPK1IP1LQ8NDC0 245 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 OR52E4Q8NGH9 312 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 SLC35B4Q969S0 331 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 ZIM2Q9NZV7 527 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.28■■□□□ 1.48
UBFD1-206ENST00000566669 ADAM21Q9UKJ8 722 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 V9GYY5 206 aaPredicted RBP24.28■■□□□ 1.48
UBFD1-206ENST00000566669 ABCA1O95477 2261 aa24.28■■□□□ 1.48
UBFD1-206ENST00000566669 NDUFS7O75251 213 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 GSNP06396 782 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 COX20Q5RI15 118 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 TMEM225Q6GV28 225 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms