RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	HNRNPCL3	B7ZW38	293 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	CLOCK	O15516	846 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	HNRNPCL1	O60812	293 aa	Known RBP	10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	ANP32D	O95626	131 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	LY6G6D	O95868	133 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	BCHE	P06276	602 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	SOD3	P08294	240 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	ITGA5	P08648	1049 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	HNRNPCL4	P0DMR1	293 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	CCNA2	P20248	432 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	CRAT	P43155	626 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	OR2B6	P58173	313 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	RPS4X	P62701	263 aa	Known RBP	10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC17A1	Q14916	467 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	PGGHG	Q32M88	737 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	ALKBH2	Q6NS38	261 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	LSR	Q86X29	649 aa	Predicted RBP	10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	KBTBD8	Q8NFY9	601 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC35B4	Q969S0	331 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	MUCL1	Q96DR8	90 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	DNAJA3	Q96EY1	480 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	TMEM19	Q96HH6	336 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	GRIP2	Q9C0E4	1043 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	BCL2L10	Q9HD36	194 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	ASB6	Q9NWX5	421 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	LAMP3	Q9UQV4	416 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC9A8	Q9Y2E8	581 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	PCDHB14	Q9Y5E9	798 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481	GMEB1	Q9Y692	573 aa		10.26	□□□□□ -0.77
KIFC3-222	ENST00000565481		A0A096LPI6	279 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	LIPT2	A6NK58	231 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	NPIPB7	O75200	414 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	MRPL33	O75394	65 aa	Known RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	IGHV3-9	P01782	118 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	GKN3P	P0CG01	181 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	IDUA	P35475	653 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	ATP5J2	P56134	94 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	FADD	Q13158	208 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	LARS2	Q15031	903 aa	Known RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	RGN	Q15493	299 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	STK11	Q15831	433 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	C6orf10	Q5SRN2	563 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	LRIF1	Q5T3J3	769 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	C1QTNF12	Q5T7M4	302 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	WBP2NL	Q6ICG8	309 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481		Q71RC1	249 aa	Predicted RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	DTX2	Q86UW9	622 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	FUNDC1	Q8IVP5	155 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	CLIP4	Q8N3C7	705 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	SMAP2	Q8WU79	429 aa	Predicted RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	TMEM45B	Q96B21	275 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	MUS81	Q96NY9	551 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	NAA11	Q9BSU3	229 aa	Predicted RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	SF3B5	Q9BWJ5	86 aa	Known RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	SPATA9	Q9BWV2	254 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	PIF1	Q9H611	641 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	A4GALT	Q9NPC4	353 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC52A3	Q9NQ40	469 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	TCF7L2	Q9NQB0	619 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	PARPBP	Q9NWS1	579 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	TAS2R16	Q9NYV7	291 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	DCTN4	Q9UJW0	460 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC25A15	Q9Y619	301 aa		10.25	□□□□□ -0.77
KIFC3-222	ENST00000565481	CHD3	Q12873	2000 aa	Known RBP	10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	COL6A5	A8TX70	2615 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	TRBV5-3	A0A0A0MS03	114 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	AQP7P3	A6NL99	342 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481		A8MVM7	634 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	TMEM229A	B2RXF0	380 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	CLIC1	O00299	241 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	FZD7	O75084	574 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	RAD51D	O75771	328 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	CD8A	P01732	235 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	GPI	P06744	558 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	NUDT7	P0C024	238 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	PRG2	P13727	222 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	CXCR1	P25024	350 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	IDH3A	P50213	366 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	P2RY4	P51582	365 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	FOXG1	P55316	489 aa	Predicted RBP	10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	ETFDH	Q16134	617 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	GABRA6	Q16445	453 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	OR7E24	Q6IFN5	339 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	SLC2A7	Q6PXP3	512 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	BLOC1S3	Q6QNY0	202 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	MSRB3	Q8IXL7	192 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	UBE2J2	Q8N2K1	259 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	TMEM99	Q8N816	258 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	ZIC4	Q8N9L1	334 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	OR9K2	Q8NGE7	335 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	C3orf49	Q96BT1	292 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	BOD1	Q96IK1	185 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	RADIL	Q96JH8	1075 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	EBF4	Q9BQW3	602 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	CCDC28B	Q9BUN5	200 aa		10.24	□□□□□ -0.77
KIFC3-222	ENST00000565481	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms