RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PNPLA6Q8IY17 1366 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 RPAP1Q9BWH6 1393 aaPredicted RBP3.08□□□□□ -1.92
CHD9-215ENST00000565442 ATAD2BQ9ULI0 1458 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 TDRD6O60522 2096 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 A6NIZ1 184 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 RIPK2O43353 540 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 ZNF780AO75290 641 aaPredicted RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 HPNP05981 417 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 DBTP11182 482 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 NPR2P20594 1047 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 CD1BP29016 333 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 QARSP47897 775 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 CCT3P49368 545 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 RAP1BP61224 184 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 TIMM10P62072 90 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 TGFBR3Q03167 851 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 TLE4Q04727 773 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 KLRB1Q12918 225 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 RIPK1Q13546 671 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 ZNF630Q2M218 657 aaPredicted RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 CCDC14Q49A88 953 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 BCL7AQ4VC05 210 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 SFT2D3Q587I9 215 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 C1orf220Q5T0J3 134 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 C1orf146Q5VVC0 180 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 CENPPQ6IPU0 288 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 IL34Q6ZMJ4 242 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 ZNF679Q8IYX0 411 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 ZCCHC7Q8N3Z6 543 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 OR4K14Q8NGD5 310 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 UBE2E3Q969T4 207 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 RPUSD4Q96CM3 377 aaKnown RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 SEC22AQ96IW7 307 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 RPRD1AQ96P16 312 aaPredicted RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 TSG101Q99816 390 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 RAB34Q9BZG1 259 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 REEP4Q9H6H4 257 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 SUDS3Q9H7L9 328 aaPredicted RBP3.07□□□□□ -1.92
CHD9-215ENST00000565442 FOLH1BQ9HBA9 442 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 AIG1Q9NVV5 245 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 ADAM22Q9P0K1 906 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 TRAF3IP3Q9Y228 551 aa3.07□□□□□ -1.92
CHD9-215ENST00000565442 IGHV3OR16-13A0A075B7E8 117 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 CLRN2A0PK11 232 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 USP27XA6NNY8 438 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 MED7O43513 233 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 PRKAB2O43741 272 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 UGT1A9O60656 530 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 RAMP3O60896 148 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 SURF6O75683 361 aaKnown RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 BBOX1O75936 387 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 OXSR1O95747 527 aaPredicted RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 POU2F1P14859 743 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 COX7A1P24310 79 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 MAGEA8P43361 318 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 ATP1B3P54709 279 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 SELENOTP62341 195 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 NCBP1Q09161 790 aaKnown RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 CARD16Q5EG05 197 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 PAGE3Q5JUK9 113 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 OR52E8Q6IFG1 317 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 PGAP1Q75T13 922 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 GDPD3Q7L5L3 318 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 ZNF571Q7Z3V5 609 aaPredicted RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 RDH10Q8IZV5 341 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 EIF1ADQ8N9N8 165 aaKnown RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 OR52H1Q8NGJ2 320 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 SH3TC1Q8TE82 1336 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 SCFD1Q8WVM8 642 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 DNAJA4Q8WW22 397 aaPredicted RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 PAGE5Q96GU1 130 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 SLC41A3Q96GZ6 507 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 CLCC1Q96S66 551 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 NAT9Q9BTE0 207 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 NT5C3AQ9H0P0 336 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 THUMPD1Q9NXG2 353 aaKnown RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 ADAM28Q9UKQ2 775 aa3.06□□□□□ -1.92
CHD9-215ENST00000565442 RPL36Q9Y3U8 105 aaKnown RBP3.06□□□□□ -1.92
CHD9-215ENST00000565442 PRRC2AP48634 2157 aaKnown RBP3.05□□□□□ -1.92
CHD9-215ENST00000565442 ARHGAP23Q9P227 1491 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 PLEKHH1Q9ULM0 1364 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 IGHV1OR21-1A0A087WYE8 117 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 IQANK1A0A1B0GTG1 560 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 TCRBV9S1A1TA0A576 114 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 A8MXQ7 604 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 GFYI3L273 518 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 IGLV1-47P01700 117 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 P04436 131 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 CXCR2P25025 360 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 CCR1P32246 355 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 RFC4P35249 363 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 GSSP48637 474 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 PSG7Q13046 419 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 ARFRP1Q13795 201 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 VGLL4Q14135 290 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 DUSP7Q16829 419 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 MAJINQ3KP22 176 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 SAMD4BQ5PRF9 694 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms