RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 AAED1Q7RTV5 226 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 CNOT9Q92600 299 aaKnown RBP18.29■□□□□ 0.52
HERC2-204ENST00000563945 NEURL3Q96EH8 262 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 VRK1Q99986 396 aaPredicted RBP18.29■□□□□ 0.52
HERC2-204ENST00000563945 SLC35A5Q9BS91 424 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 CHODLQ9H9P2 273 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 OSGIN1Q9UJX0 560 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 MOKQ9UQ07 419 aa18.29■□□□□ 0.52
HERC2-204ENST00000563945 TMEM72A0PK05 275 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 CLDN24A6NM45 220 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 PDLIM1O00151 329 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 NDUFS8O00217 210 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 SCN2BO60939 215 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 LY6HO94772 140 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 MYZAPP0CAP1 466 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 APEHP13798 732 aaKnown RBP18.28■□□□□ 0.52
HERC2-204ENST00000563945 IL7RP16871 459 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 CXCR1P25024 350 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 THBS2P35442 1172 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 SLC1A3P43003 542 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 CLNS1AP54105 237 aaKnown RBP18.28■□□□□ 0.52
HERC2-204ENST00000563945 SLC17A1Q14916 467 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 IQCCQ4KMZ1 466 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 SAXO2Q658L1 398 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 PAQR6Q6TCH4 344 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 TRIML2Q8N7C3 387 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 POMGNT2Q8NAT1 580 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 C3orf49Q96BT1 292 aa18.28■□□□□ 0.52
HERC2-204ENST00000563945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.28■□□□□ 0.52
HERC2-204ENST00000563945 HAX1O00165 279 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 AP3D1O14617 1153 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 KLF11O14901 512 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 GPIP06744 558 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 IMPDH2P12268 514 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 PAX7P23759 505 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 S100A3P33764 101 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 UBE2NP61088 152 aaKnown RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 DPY19L1Q2PZI1 675 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 AP1ARQ63HQ0 302 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 TMEM225Q6GV28 225 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 SLC46A3Q7Z3Q1 461 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 ARIH2OSQ8N7S6 290 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 TRNT1Q96Q11 434 aaKnown RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 ROPN1BQ9BZX4 212 aaPredicted RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 MTHFD2LQ9H903 347 aaPredicted RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 ROPN1Q9HAT0 212 aaPredicted RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 MYOZ1Q9NP98 299 aaPredicted RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 OBP2BQ9NPH6 170 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 TMEM45AQ9NWC5 275 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 LGALS13Q9UHV8 139 aa18.27■□□□□ 0.52
HERC2-204ENST00000563945 YLPM1P49750 1951 aaKnown RBP18.27■□□□□ 0.52
HERC2-204ENST00000563945 WDR91A4D1P6 747 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 CFAP73A6NFT4 308 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 CRYAAP02489 173 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 NR4A2P43354 598 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 FUT5Q11128 374 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 GSTA3Q16772 222 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 KRTAP24-1Q3LI83 254 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 GPAT4Q86UL3 456 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 ZNF440Q8IYI8 595 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 ZNF540Q8NDQ6 660 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 WDR60Q8WVS4 1066 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 TMEM45BQ96B21 275 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 TESCQ96BS2 214 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 AURKBQ96GD4 344 aaPredicted RBP18.26■□□□□ 0.51
HERC2-204ENST00000563945 SF3B5Q9BWJ5 86 aaKnown RBP18.26■□□□□ 0.51
HERC2-204ENST00000563945 TAPBPLQ9BX59 468 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 NBEAL1Q6ZS30 2694 aa18.26■□□□□ 0.51
HERC2-204ENST00000563945 LOC390937A0A1W2PQ73 354 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 AGAP5A6NIR3 686 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 VSTM5A8MXK1 200 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 HMGN4O00479 90 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 AKR7A3O95154 331 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 DBIP07108 87 aaKnown RBP18.25■□□□□ 0.51
HERC2-204ENST00000563945 C8BP07358 591 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 NR2F1P10589 423 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 SERPINF1P36955 418 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 TXNL4AP83876 142 aaKnown RBP18.25■□□□□ 0.51
HERC2-204ENST00000563945 SLC25A3Q00325 362 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 CEACAM7Q14002 265 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 CASP8Q14790 479 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 OR7A5Q15622 319 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 SYPL1Q16563 259 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 SWI5Q1ZZU3 235 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 HIKESHIQ53FT3 197 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 SPANXN4Q5MJ08 99 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 LRRC74BQ6ZQY2 392 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 SPATA19Q7Z5L4 167 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 RNF130Q86XS8 419 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 KIRREL3Q8IZU9 778 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 TMEM99Q8N816 258 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 ANKFN1Q8N957 763 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 OR9K2Q8NGE7 335 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 FOXN4Q96NZ1 517 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 C19orf24Q9BVV8 132 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 PIF1Q9H611 641 aa18.25■□□□□ 0.51
HERC2-204ENST00000563945 FAAHO00519 579 aa18.24■□□□□ 0.51
HERC2-204ENST00000563945 ITM2AO43736 263 aa18.24■□□□□ 0.51
HERC2-204ENST00000563945 SERPINE1P05121 402 aa18.24■□□□□ 0.51
HERC2-204ENST00000563945 LBPP18428 481 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms