RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 BMP4P12644 408 aa14□□□□□ -0.17
RNF40-205ENST00000563909 COX4I1P13073 169 aa14□□□□□ -0.17
RNF40-205ENST00000563909 ZNF23P17027 643 aa14□□□□□ -0.17
RNF40-205ENST00000563909 HOXB9P17482 250 aaPredicted RBP14□□□□□ -0.17
RNF40-205ENST00000563909 RPS26P62854 115 aaKnown RBP14□□□□□ -0.17
RNF40-205ENST00000563909 GTDC1Q4AE62 458 aa14□□□□□ -0.17
RNF40-205ENST00000563909 TMEM201Q5SNT2 666 aa14□□□□□ -0.17
RNF40-205ENST00000563909 ATAD3BQ5T9A4 648 aa14□□□□□ -0.17
RNF40-205ENST00000563909 REP15Q6BDI9 236 aa14□□□□□ -0.17
RNF40-205ENST00000563909 GTF2IRD2BQ6EKJ0 949 aa14□□□□□ -0.17
RNF40-205ENST00000563909 DLEU7Q6UYE1 221 aa14□□□□□ -0.17
RNF40-205ENST00000563909 NUFIP2Q7Z417 695 aaKnown RBP14□□□□□ -0.17
RNF40-205ENST00000563909 GTF2IRD2Q86UP8 949 aa14□□□□□ -0.17
RNF40-205ENST00000563909 OR5D16Q8NGK9 328 aa14□□□□□ -0.17
RNF40-205ENST00000563909 FAM110BQ8TC76 370 aa14□□□□□ -0.17
RNF40-205ENST00000563909 FAM216AQ8WUB2 273 aa14□□□□□ -0.17
RNF40-205ENST00000563909 CDS1Q92903 461 aa14□□□□□ -0.17
RNF40-205ENST00000563909 OTUB1Q96FW1 271 aaPredicted RBP14□□□□□ -0.17
RNF40-205ENST00000563909 RTN4RQ9BZR6 473 aa14□□□□□ -0.17
RNF40-205ENST00000563909 SERHL2Q9H4I8 314 aa14□□□□□ -0.17
RNF40-205ENST00000563909 GID8Q9NWU2 228 aa14□□□□□ -0.17
RNF40-205ENST00000563909 NPAP1Q9NZP6 1156 aa14□□□□□ -0.17
RNF40-205ENST00000563909 FLRT3Q9NZU0 649 aa14□□□□□ -0.17
RNF40-205ENST00000563909 VAPAQ9P0L0 249 aa14□□□□□ -0.17
RNF40-205ENST00000563909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14□□□□□ -0.17
RNF40-205ENST00000563909 CORO2BQ9UQ03 480 aa14□□□□□ -0.17
RNF40-205ENST00000563909 TRBV5-3A0A0A0MS03 114 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 EVPLLA8MZ36 301 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 KCNK2O95069 426 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 OR12D1P0DN82 309 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 LCN1P31025 176 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 CRATP43155 626 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 RFX3P48380 749 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 CLK3P49761 638 aaKnown RBP13.99□□□□□ -0.17
RNF40-205ENST00000563909 CHRNB3Q05901 458 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 FADDQ13158 208 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 RUNDC3AQ59EK9 446 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 FAM91A1Q658Y4 838 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 TNFAIP8L2Q6P589 184 aaPredicted RBP13.99□□□□□ -0.17
RNF40-205ENST00000563909 TREML1Q86YW5 311 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 MSRB3Q8IXL7 192 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 POU5F2Q8N7G0 328 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 PNPT1Q8TCS8 783 aaKnown RBP13.99□□□□□ -0.17
RNF40-205ENST00000563909 XAGE5Q8WWM1 108 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 CGREF1Q99674 301 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 METTL17Q9H7H0 456 aaPredicted RBP13.99□□□□□ -0.17
RNF40-205ENST00000563909 THUMPD1Q9NXG2 353 aaKnown RBP13.99□□□□□ -0.17
RNF40-205ENST00000563909 SLC25A37Q9NYZ2 338 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 GMEB1Q9Y692 573 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
RNF40-205ENST00000563909 SMAD9O15198 467 aaKnown RBP13.98□□□□□ -0.17
RNF40-205ENST00000563909 GMFGO60234 142 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 LYZL6O75951 148 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 LGALS3BPQ08380 585 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 SPOCK1Q08629 439 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 RGNQ15493 299 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 TMEM44Q2T9K0 475 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 TRMT5Q32P41 509 aaKnown RBP13.98□□□□□ -0.17
RNF40-205ENST00000563909 ARHGAP11BQ3KRB8 267 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 DCST2Q5T1A1 773 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.98□□□□□ -0.17
RNF40-205ENST00000563909 TREML4Q6UXN2 200 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 B3GLCTQ6Y288 498 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 RINLQ6ZS11 566 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 C16orf62Q7Z3J2 963 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 PEG10Q86TG7 708 aaKnown RBP13.98□□□□□ -0.17
RNF40-205ENST00000563909 MARCH3Q86UD3 253 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 OR2V1Q8NHB1 315 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 RAB8BQ92930 207 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 AURKBQ96GD4 344 aaPredicted RBP13.98□□□□□ -0.17
RNF40-205ENST00000563909 ADGRG7Q96K78 797 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 ANKRD27Q96NW4 1050 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 SH3GL1Q99961 368 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 EFCAB1Q9HAE3 211 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 MGAT4BQ9UQ53 548 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 PCDHGB1Q9Y5G3 927 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 KCNE3Q9Y6H6 103 aa13.98□□□□□ -0.17
RNF40-205ENST00000563909 LOC390937A0A1W2PQ73 354 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 LRP5LA4QPB2 252 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 ZNF814B7Z6K7 855 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 HMGN4O00479 90 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 TNFSF11O14788 317 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 ADAMDEC1O15204 470 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 NDUFB5O43674 189 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 IGKV1D-16P01601 117 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 C1QCP02747 245 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 MVDP53602 400 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 AWAT1Q58HT5 328 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 COX20Q5RI15 118 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 TMEM108Q6UXF1 575 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 TUSC5Q8IXB3 177 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 ZNF418Q8TF45 676 aaPredicted RBP13.97□□□□□ -0.17
RNF40-205ENST00000563909 ABHD3Q8WU67 409 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 RCN3Q96D15 328 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 SDF2Q99470 211 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 CPPED1Q9BRF8 314 aaPredicted RBP13.97□□□□□ -0.17
RNF40-205ENST00000563909 HOXD1Q9GZZ0 328 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 POLE3Q9NRF9 147 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms