RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 RBM4BQ9BQ04 359 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 THUMPD3Q9BV44 507 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 OR11A1Q9GZK7 315 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 PIGUQ9H490 435 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CTPS2Q9NRF8 586 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 DUSP22Q9NRW4 184 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 SIRT3Q9NTG7 399 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 ACER3Q9NUN7 267 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 PARPBPQ9NWS1 579 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 MYEF2Q9P2K5 600 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 KCNE5Q9UJ90 142 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 HDGFL3Q9Y3E1 203 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 KCNE3Q9Y6H6 103 aa6.6□□□□□ -1.35
HERPUD1-206ENST00000563343 CENPVL1A0A0U1RR11 272 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 H3BNH8 94 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 M0QZ24 198 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 PDPK1O15530 556 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 PPIHO43447 177 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 HMGN2P05204 90 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 RBP1P09455 135 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 UBL4AP11441 157 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 IMPDH2P12268 514 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 CBR1P16152 277 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 TCN1P20061 433 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 GATA3P23771 443 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 ALDH3B1P43353 468 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 CCR4P51679 360 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 RELBQ01201 579 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 BAMBIQ13145 260 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 SNTB2Q13425 540 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 NAB1Q13506 487 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 LASP1Q14847 261 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 MAD2L1BPQ15013 274 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 RASA2Q15283 850 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 UNC50Q53HI1 259 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF311Q5JNZ3 666 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 DCST2Q5T1A1 773 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 KPRPQ5T749 579 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 SAXO2Q658L1 398 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 ANKRD26P1Q6NSI1 321 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 RBMS3Q6XE24 437 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 TMCO5AQ8N6Q1 288 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 KIR3DL3Q8N743 410 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 POMGNT2Q8NAT1 580 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 DEFB108BQ8NET1 73 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 METTL6Q8TCB7 284 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 JADE3Q92613 823 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 POP5Q969H6 163 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 FAM120BQ96EK7 910 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 AURKBQ96GD4 344 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF317Q96PQ6 595 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 CCT8L2Q96SF2 557 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF416Q9BWM5 594 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 LAT2Q9GZY6 243 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 HOXD1Q9GZZ0 328 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 MS4A5Q9H3V2 200 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 NOX3Q9HBY0 568 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 SERINC1Q9NRX5 453 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 TMEM45AQ9NWC5 275 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 PLEK2Q9NYT0 353 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 CHRNA9Q9UGM1 479 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 NUP50Q9UKX7 468 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 TRAPPC4Q9Y296 219 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 SNX24Q9Y343 169 aa6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 POLR3HQ9Y535 204 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-206ENST00000563343 A0A096LPE4 126 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 A0A1W2PPZ6 126 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 VSTM5A8MXK1 200 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM229AB2RXF0 380 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TRIM49D1C9J1S8 452 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 PIP5K1BO14986 540 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 PIN1P1O15428 100 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TBX19O60806 448 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 SMIM24O75264 130 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 BCAS1O75363 584 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TSPAN15O95858 294 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 KNG1P01042 644 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 VSIG8P0DPA2 414 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TFPIP10646 304 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ATP6V1C1P21283 382 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 CDC25BP30305 580 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 HMOX2P30519 316 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 APOBEC1P41238 236 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 CLK1P49759 484 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 OR2B6P58173 313 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 UBE2NP61088 152 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 PLAURQ03405 335 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 MVKQ03426 396 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 DAG1Q14118 895 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 KIAA0040Q15053 153 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF678Q5SXM1 525 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 PDZK1Q5T2W1 519 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 AVPI1Q5T686 147 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 KRT80Q6KB66 452 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 GPRIN3Q6ZVF9 776 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 SZRD1Q7Z422 152 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 LRP11Q86VZ4 500 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ADGRG3Q86Y34 549 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms