RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 OR8J2Q8NGG1 315 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 XAGE5Q8WWM1 108 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 C3orf49Q96BT1 292 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 ROPN1LQ96C74 230 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 TUBGCP3Q96CW5 907 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 FOXN4Q96NZ1 517 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 OR11A1Q9GZK7 315 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 RAB1BQ9H0U4 201 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 TMEM45AQ9NWC5 275 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 NOP53Q9NZM5 478 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 GIMAP2Q9UG22 337 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 TMED7-TICAM2A0A0A6YYA0 188 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 G6PDP11413 515 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 UQCRC2P22695 453 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 GIFP27352 417 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 ALDH3A1P30838 453 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 IDH2P48735 452 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 CHN2P52757 468 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 TXNL4AP83876 142 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 EMX2Q04743 252 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 GNA13Q14344 377 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 CARTPTQ16568 116 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 ANXA8L1Q5VT79 327 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 FRRS1Q6ZNA5 592 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 OR4F15Q8NGB8 312 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 OR4A15Q8NGL6 344 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 APOPT1Q96IL0 206 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 C3orf30Q96M34 536 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 PLK3Q9H4B4 646 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 TMED7Q9Y3B3 224 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 PCDHB14Q9Y5E9 798 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 MALRD1Q5VYJ5 2156 aa13.73□□□□□ -0.21
HERPUD1-205ENST00000562914 HEATR1Q9H583 2144 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 PRSS51A0A1B0GVH4 220 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 SNUPNO95149 360 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 VAMP5O95183 116 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 SHBGP04278 402 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 GPIP06744 558 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 TACSTD2P09758 323 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 OR12D1P0DN82 309 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 IMPDH2P12268 514 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 HOXB1P14653 301 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC1A3P43003 542 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 KHKP50053 298 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 GSTA3Q16772 222 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 OTUD3Q5T2D3 398 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 OR4F3Q6IEY1 312 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 AAED1Q7RTV5 226 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 MEX3DQ86XN8 651 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 CLECL1Q8IZS7 167 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 MAGEE2Q8TD90 523 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 NEU4Q8WWR8 484 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 CRNNQ9UBG3 495 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
HERPUD1-205ENST00000562914 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 A0A0A6YYJ9 748 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 IGHV1-18A0A0C4DH31 117 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 SMIM23A6NLE4 172 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 ZNF587BE7ETH6 402 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 SLCO1B7G3V0H7 640 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 KRT33AO76009 404 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 OR4A8P0C604 315 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 CCNA2P20248 432 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 TACR3P29371 465 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 ANXA11P50995 505 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 UBE2NP61088 152 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 ADIPOQQ15848 244 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 DPY19L1Q2PZI1 675 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 TBRG1Q3YBR2 411 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 SAXO2Q658L1 398 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 OR9K2Q8NGE7 335 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 ZNF442Q9H7R0 627 aa13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 TMEFF2Q9UIK5 374 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-205ENST00000562914 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 AQP7P3A6NL99 342 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 STAMBPO95630 424 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 NUDT17P0C025 328 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 NAAAQ02083 359 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 FUT5Q11128 374 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 ZSWIM7Q19AV6 140 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
HERPUD1-205ENST00000562914 HIKESHIQ53FT3 197 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms