RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SMR3AQ99954 134 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 POTEKPQ9BYX7 375 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 OPN3Q9H1Y3 402 aaPredicted RBP14.75□□□□□ -0.05
CDT1-202ENST00000562747 EFCAB1Q9HAE3 211 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 BCO1Q9HAY6 547 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 C12orf10Q9HB07 376 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 ELOVL5Q9NYP7 299 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 TMEM181Q9P2C4 612 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 TESQ9UGI8 421 aaKnown RBP14.75□□□□□ -0.05
CDT1-202ENST00000562747 AP3M1Q9Y2T2 418 aa14.75□□□□□ -0.05
CDT1-202ENST00000562747 IGHV3-15A0A0B4J1V0 119 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 TUBAL3A6NHL2 446 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 AIM2O14862 343 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 ATE1O95260 518 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 FESP07332 822 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 YES1P07947 543 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 PRDX6P30041 224 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 CPOXP36551 454 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 NCALDP61601 193 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 HOXC5Q00444 222 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 VEZF1Q14119 521 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 ZNF474Q6S9Z5 364 aaPredicted RBP14.74□□□□□ -0.05
CDT1-202ENST00000562747 PIGWQ7Z7B1 504 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 ATG4DQ86TL0 474 aaPredicted RBP14.74□□□□□ -0.05
CDT1-202ENST00000562747 ZNF610Q8N9Z0 462 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 WFDC11Q8NEX6 87 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 RASSF5Q8WWW0 418 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 MBD6Q96DN6 1003 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 ZNF583Q96ND8 569 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 PSD2Q9BQI7 771 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 TRIM2Q9C040 744 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 PIF1Q9H611 641 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 RPS6KB2Q9UBS0 482 aa14.74□□□□□ -0.05
CDT1-202ENST00000562747 NSD1Q96L73 2696 aaPredicted RBP14.74□□□□□ -0.05
CDT1-202ENST00000562747 ZC3H12DA2A288 527 aaKnown RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 A8MVM7 634 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 FAM220BPB1ANY3 271 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 EIF1BO60739 113 aaKnown RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 LGI1O95970 557 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 OPN1SWP03999 348 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 CD79BP40259 229 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 KCNJ5P48544 419 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 RGS8P57771 180 aaPredicted RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 OR2B6P58173 313 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 SLC35A1P78382 337 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 RASGEF1BQ0VAM2 473 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 PDK3Q15120 406 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 DUSP7Q16829 419 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 ABLIM2Q6H8Q1 611 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 C6orf89Q6UWU4 347 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 HACD2Q6Y1H2 254 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 Q71RC1 249 aaPredicted RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 STK32CQ86UX6 486 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 TUSC5Q8IXB3 177 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 SMYD1Q8NB12 490 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 OR52E4Q8NGH9 312 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 SLC26A7Q8TE54 656 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 FAM222BQ8WU58 562 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 DNAJA4Q8WW22 397 aaPredicted RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 HOPXQ9BPY8 73 aaPredicted RBP14.73□□□□□ -0.05
CDT1-202ENST00000562747 FANCFQ9NPI8 374 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 ARL2BPQ9Y2Y0 163 aa14.73□□□□□ -0.05
CDT1-202ENST00000562747 ZNF724A8MTY0 619 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 TMEM229AB2RXF0 380 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 GPIP06744 558 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 IMPDH2P12268 514 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 POU2F1P14859 743 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 FOSL1P15407 271 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 HTR2AP28223 471 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 IDUAP35475 653 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 H3F3AP84243 136 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 FAM27E3Q08E93 113 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 NRF1Q16656 503 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 FAM91A1Q658Y4 838 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 C8orf82Q6P1X6 216 aaPredicted RBP14.72□□□□□ -0.05
CDT1-202ENST00000562747 BEND4Q6ZU67 534 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 RANBP3LQ86VV4 465 aaPredicted RBP14.72□□□□□ -0.05
CDT1-202ENST00000562747 KRTAP1-3Q8IUG1 177 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 OR2T12Q8NG77 320 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 GPR32P1Q8NGA4 272 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 PIGXQ8TBF5 258 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 STK35Q8TDR2 534 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 TAMM41Q96BW9 452 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 ARHGDIGQ99819 225 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 NAA11Q9BSU3 229 aaPredicted RBP14.72□□□□□ -0.05
CDT1-202ENST00000562747 TMEM27Q9HBJ8 222 aa14.72□□□□□ -0.05
CDT1-202ENST00000562747 ING1Q9UK53 422 aaPredicted RBP14.72□□□□□ -0.05
CDT1-202ENST00000562747 IGKV3D-15A0A087WSY6 115 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 A0A1B0GWA3 101 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 ELOA3DA6NLF2 546 aaPredicted RBP14.71□□□□□ -0.05
CDT1-202ENST00000562747 NDUFAB1O14561 156 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 FMO6PO60774 539 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 NPIPB7O75200 414 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 RAF1P04049 648 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 PNMTP11086 282 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 EPXP11678 715 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 CD247P20963 164 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 FPR1P21462 350 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 LTBQ06643 244 aa14.71□□□□□ -0.05
CDT1-202ENST00000562747 BNIP2Q12982 314 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms