RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PNLIPRP2P54317 469 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SUMO3P55854 103 aaPredicted RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 PER3P56645 1201 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TSPAN5P62079 268 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SCN1BQ07699 218 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MRPL49Q13405 166 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 ZNF691Q5VV52 312 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 VN1R4Q7Z5H5 301 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 CPEB2Q7Z5Q1 589 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 GPAT4Q86UL3 456 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GPR137CQ8N3F9 429 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 ZNF565Q8N9K5 539 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 B3GNT7Q8NFL0 401 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 OR52E2Q8NGJ4 325 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SLC2A12Q8TD20 617 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 DEDD2Q8WXF8 326 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 DNASE2BQ8WZ79 361 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 LRFN5Q96NI6 719 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TBX5Q99593 518 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PAPOLGQ9BWT3 736 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 HDHD5Q9BXW7 423 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MCTS1Q9ULC4 181 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 PLEKHA6Q9Y2H5 1048 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 NPIPA5A0A0B4J1W7 369 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PRAMEF25A6NGN4 478 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 FRS3O43559 492 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PRKRAO75569 313 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 MAOAP21397 527 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 BCKDHBP21953 392 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PDX1P52945 283 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 CDK10Q15131 360 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SLC18B1Q6NT16 456 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 OR7G2Q8NG99 324 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 KLHL15Q96M94 604 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SLC19A3Q9BZV2 496 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 RAB33BQ9H082 229 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 HRH3Q9Y5N1 445 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MYO10Q9HD67 2058 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 FNDC1Q4ZHG4 1894 aaPredicted RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 TRAV36DV7A0A075B6V5 113 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 FRG2CA6NGY1 282 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 H7C1Q1 480 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 DHFRP00374 187 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GKN3PP0CG01 181 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 NAGAP17050 411 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GALNSP34059 522 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 CCL7P80098 99 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GFOD2Q3B7J2 385 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SLC22A10Q63ZE4 541 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TMEM178AQ8NBL3 297 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 NRG4Q8WWG1 115 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 ASH2LQ9UBL3 628 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GNG8Q9UK08 70 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TANC1Q9C0D5 1861 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PRAMEF33A0A0G2JMD5 474 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 A0A1B0GWA3 101 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 AGAP5A6NIR3 686 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SULT2B1O00204 365 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TOR1AO14656 332 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TBX1O43435 398 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PRAMEF10O60809 474 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 RPP30P78346 268 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 ARG2P78540 354 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MAB21L1Q13394 359 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TMEM163Q8TC26 289 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 HRASLS5Q96KN8 279 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PHOX2BQ99453 314 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 ACOT13Q9NPJ3 140 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 NUDT19A8MXV4 375 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 C1orf196B1AJZ1 125 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 FAM227AF5H4B4 570 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 CTSVO60911 334 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 RAB3BP20337 219 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 RIDAP52758 137 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 RAE1P78406 368 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 TRMT12Q53H54 448 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 PLAG1Q6DJT9 500 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 GRINAQ7Z429 371 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 ABHD12BQ7Z5M8 362 aaPredicted RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 LRRC56Q8IYG6 542 aaPredicted RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 NANOS1Q8WY41 292 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 SLC35A4Q96G79 324 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 SGCZQ96LD1 299 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MMP27Q9H306 513 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 CNIH4Q9P003 139 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 NPFFR2Q9Y5X5 522 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 UBE2QL1A1L167 161 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 A6NL46 340 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 UPK1AO00322 258 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 EIF1BO60739 113 aaKnown RBP6.97□□□□□ -1.29
TCF4-216ENST00000562680 ERCC1P07992 297 aaPredicted RBP6.97□□□□□ -1.29
TCF4-216ENST00000562680 SPARCP09486 303 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 IFI6P09912 130 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 H2BFMP0C1H6 154 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 SFTPCP11686 197 aa6.97□□□□□ -1.29
TCF4-216ENST00000562680 ZNF26P17031 533 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms