RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 TRAM1Q15629 374 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 ZNF181Q2M3W8 571 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 TBC1D25Q3MII6 688 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 CRTC2Q53ET0 693 aaPredicted RBP11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 EMC4Q5J8M3 183 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 PHF19Q5T6S3 580 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 MARCH3Q86UD3 253 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 KLBQ86Z14 1044 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 C10orf53Q8N6V4 93 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 LRRC17Q8N6Y2 441 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 DTWD2Q8NBA8 298 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 SMPDL3BQ92485 455 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 SLC25A46Q96AG3 418 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 MRPL48Q96GC5 212 aaKnown RBP11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 PHOX2BQ99453 314 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 MROQ9BYG7 248 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 NANSQ9NR45 359 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 TOR4AQ9NXH8 423 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 NXT1Q9UKK6 140 aaKnown RBP11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 POLHQ9Y253 713 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 NOX1Q9Y5S8 564 aa11.53□□□□□ -0.56
AC055717.2-201ENST00000561864 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CDC14CA4D256 554 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 LRRN3E7EW58 273 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 UPK1BO75841 260 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CDRT1O95170 752 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 TXNDC12O95881 172 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 MT-ATP6P00846 226 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CD14P08571 375 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 OCM2P0CE71 109 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 OCMP0CE72 109 aaPredicted RBP11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CXCR1P25024 350 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 POLR2HP52434 150 aaKnown RBP11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SLC25A1P53007 311 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 FABP5Q01469 135 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 HSF2Q03933 536 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 TRIM61Q5EBN2 209 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SPANXN2Q5MJ10 180 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 C22orf42Q6IC83 251 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 TMEM205Q6UW68 189 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 C5orf46Q6UWT4 87 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 NANOGNBQ7Z5D8 188 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 ARIH2OSQ8N7S6 290 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 LRRC75AQ8NAA5 344 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CYB561A3Q8NBI2 242 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 APCDD1LQ8NCL9 501 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SDR9C7Q8NEX9 313 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 OR4K13Q8NH42 304 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 AP3S1Q92572 193 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 CEP19Q96LK0 163 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 WDFY2Q96P53 400 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SPSB2Q99619 263 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 LPAR4Q99677 370 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 BARHL1Q9BZE3 327 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 WDR54Q9H977 334 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 SNTG1Q9NSN8 517 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 GALNT8Q9NY28 637 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 DAPK2Q9UIK4 370 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 PCDHGB7Q9Y5F8 929 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 NPFFR2Q9Y5X5 522 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 NCOR1O75376 2440 aa11.52□□□□□ -0.57
AC055717.2-201ENST00000561864 IGHV3-20A0A0C4DH32 117 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 PATE3B3GLJ2 98 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 RNF13O43567 381 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 SCO2O43819 266 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 RGS9O75916 674 aaPredicted RBP11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 SNX4O95219 450 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 HIST1H2ABP04908 130 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 MRPL3P09001 348 aaKnown RBP11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 OR2T7P0C7T2 308 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ZNF883P0CG24 379 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 CELP19835 753 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ITPKBP27987 946 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 AQP2P41181 271 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 HTR3AP46098 478 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 DIO1P49895 249 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ACTA2P62736 377 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ACTG2P63267 376 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 EGR4Q05215 589 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ATP1A4Q13733 1029 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 OXA1LQ15070 435 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 PON3Q15166 354 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
AC055717.2-201ENST00000561864 ZNF528Q3MIS6 628 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms