RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PCM1Q15154 2024 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ATP6AP2A0A1C7CYW4 349 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TCRBV3S1A0A5B6 114 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PRORSD1PA6NEY8 169 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 NPIPB15A6NHN6 443 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 NCF1BA6NI72 391 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 NCF1CA8MVU1 366 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 EVPLLA8MZ36 301 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FAM157AC9JC47 383 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 H0YIV9 168 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 J3KRW8 73 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FOXE1O00358 373 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 MANBAO00462 879 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 NR5A2O00482 541 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 HSPB6O14558 160 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 OR7A17O14581 309 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CLGNO14967 610 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 LSM1O15116 133 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 PIN1P1O15428 100 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 HCRTR1O43613 425 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SEC22BO75396 215 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PSIP1O75475 530 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 ATP6AP2O75787 350 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PDE5AO76074 875 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 OR4F21O95013 312 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SCELO95171 688 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 GOSR1O95249 250 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TNFAIP8O95379 198 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 GUCA1CO95843 209 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 COX6A1P12074 109 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 NCF1P14598 390 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 UQCRBP14927 111 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PAX1P15863 534 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ZNF8P17098 575 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 IL1RNP18510 177 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 UGT1A6P19224 532 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 UGT1A1P22309 533 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FASP25445 335 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TEAD1P28347 426 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CCR7P32248 378 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SRP14P37108 136 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 CASP2P42575 452 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 OR1D4P47884 311 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CLCNKAP51800 687 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ARHGDIAP52565 204 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SLC7A2P52569 658 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ARSFP54793 590 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CLDN8P56748 225 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 EFNB1P98172 346 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 LIPEQ05469 1076 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 HSPA14Q0VDF9 509 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TMEM115Q12893 351 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 EPS8Q12929 822 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CSTF3Q12996 717 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 RUNX2Q13950 521 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CEACAM7Q14002 265 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 GRB7Q14451 532 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ARHGAP19Q14CB8 494 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TRIP10Q15642 601 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PPP1R3AQ16821 1122 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 DEFB110Q30KQ9 67 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 VPS26BQ4G0F5 336 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 BCL7AQ4VC05 210 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FAM98BQ52LJ0 330 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 TCHHL1Q5QJ38 904 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 ACER2Q5QJU3 275 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 HENMT1Q5T8I9 393 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 ANXA8L1Q5VT79 327 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FRG2Q64ET8 278 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ARHGAP11AQ6P4F7 1023 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ERICH5Q6P6B1 374 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TMEM154Q6P9G4 183 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CYP20A1Q6UW02 462 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ABRAXAS1Q6UWZ7 409 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 IZUMO2Q6UXV1 221 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 COLCA1Q6ZS62 124 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 Q6ZSR9 355 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PRSS45Q7RTY3 260 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 R3HCC1LQ7Z5L2 792 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 TSPAN33Q86UF1 283 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TRIM73Q86UV7 250 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 OOSP2Q86WS3 158 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FUNDC1Q8IVP5 155 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SLC22A15Q8IZD6 547 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 METTL27Q8N6F8 245 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 NRACQ8N912 160 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 AMER3Q8N944 861 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ANKFN1Q8N957 763 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 SNX31Q8N9S9 440 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PAPD5Q8NDF8 572 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 OR4F6Q8NGB9 312 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 OR4E2Q8NGC2 313 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PYDC1Q8WXC3 89 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ELMO1Q92556 727 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PPWD1Q96BP3 646 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 TESCQ96BS2 214 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CMTM7Q96FZ5 175 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CENPNQ96H22 339 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 COX14Q96I36 57 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms