RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RHOXF1Q8NHV9 184 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TM9SF4Q92544 642 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TAAR8Q969N4 342 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 KTI12Q96EK9 354 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 SIGLEC12Q96PQ1 595 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 KLHDC3Q9BQ90 382 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 PIGQQ9BRB3 760 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 IFT27Q9BW83 186 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TAPBPLQ9BX59 468 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 ASPNQ9BXN1 380 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 OR52D1Q9H346 318 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 UBQLN3Q9H347 655 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 ZNF552Q9H707 407 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 FKRPQ9H9S5 495 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 RASSF1Q9NS23 344 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TVP23BQ9NYZ1 205 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 PLA2G3Q9NZ20 509 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TPRKBQ9Y3C4 175 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 KCNMB2Q9Y691 235 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 WDFY3Q8IZQ1 3526 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 SH3D21A4FU49 640 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 GJE1A6NN92 205 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 BLOC1S5-TXNDC5H3BN57 136 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 TLX3O43711 291 aaPredicted RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 IDH3BO43837 385 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 OR6A2O95222 327 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 F10P00742 488 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 CCDC159P0C7I6 412 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 ZNF17P17021 662 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 EEF1B2P24534 225 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 ELK4P28324 431 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 NOS3P29474 1203 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 SRD5A2P31213 254 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 GRK5P34947 590 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 RPL4P36578 427 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 SNRPGP62308 76 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 EGR4Q05215 589 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 FOXF1Q12946 379 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 SELENBP1Q13228 472 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 KCTD21Q4G0X4 260 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 CLEC12AQ5QGZ9 265 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 MEDAGQ5VYS4 303 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 ACSM5Q6NUN0 579 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 DPY19L2P2Q6ZN68 376 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 LRRC69Q6ZNQ3 347 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 Q6ZPB1 254 aaPredicted RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 ZNF227Q86WZ6 799 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 ENTHD1Q8IYW4 607 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 LNX2Q8N448 690 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 ATP6V1C2Q8NEY4 427 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 FDCSPQ8NFU4 85 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 OR14L1PQ8NHC6 308 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 MFSD8Q8NHS3 518 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 ZNF524Q96C55 264 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 SLC25A36Q96CQ1 311 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 POLDIP3Q9BY77 421 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 ZNF696Q9H7X3 374 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 TUBA8Q9NY65 449 aaPredicted RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 H2AFY2Q9P0M6 372 aaPredicted RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 RNF6Q9Y252 685 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 CORINQ9Y5Q5 1042 aa9.32□□□□□ -0.92
USP3-219ENST00000561326 TNRC6AQ8NDV7 1962 aaKnown RBP9.32□□□□□ -0.92
USP3-219ENST00000561326 MED12Q93074 2177 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 APC2O95996 2303 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TRAV27A0A087WT01 109 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 A0A087WXM4 84 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 NME2P1O60361 137 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ZIC3O60481 467 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 NPIPB7O75200 414 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TRAPPC6AO75865 159 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 CEACAM4O75871 244 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 IFNGP01579 166 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 BGLAPP02818 100 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ASAH2BP0C7U1 165 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PEPDP12955 493 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 NME2P22392 152 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 GDF1P27539 372 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 IDUAP35475 653 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PCYT1AP49585 367 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 UCNP55089 124 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 GPR85P60893 370 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PLGLB1Q02325 96 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PMS2P3Q13401 168 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 OCLNQ16625 522 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PGGHGQ32M88 737 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 SYT14P1Q58G82 188 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 RAET1LQ5VY80 246 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TMEM154Q6P9G4 183 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 IGFL2Q6UWQ7 119 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 NANOGNBQ7Z5D8 188 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 SULF2Q8IWU5 870 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ZADH2Q8N4Q0 377 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms