RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 DNM1P46Q6ZS02 220 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 LSRQ86X29 649 aaPredicted RBP14.26□□□□□ -0.13
SNX1-213ENST00000561026 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 MAPK1IP1LQ8NDC0 245 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 OR52E4Q8NGH9 312 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 MAELQ96JY0 434 aaKnown RBP14.26□□□□□ -0.13
SNX1-213ENST00000561026 PRDM4Q9UKN5 801 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 SLC9A8Q9Y2E8 581 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 ALPK2Q86TB3 2170 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 A0A1W2PR80 420 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 KIAA1324LA8MWY0 1029 aaPredicted RBP14.25□□□□□ -0.13
SNX1-213ENST00000561026 PTNP21246 168 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 CD40P25942 277 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 AGAP6Q5VW22 663 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 ATG16L1Q676U5 607 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 NXNQ6DKJ4 435 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 SLC22A25Q6T423 547 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 CASP12Q6UXS9 341 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 OR52P1PQ8NH57 321 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 MGARPQ8TDB4 240 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 BARX1Q9HBU1 254 aaPredicted RBP14.25□□□□□ -0.13
SNX1-213ENST00000561026 SDR39U1Q9NRG7 319 aaPredicted RBP14.25□□□□□ -0.13
SNX1-213ENST00000561026 SLC7A10Q9NS82 523 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 P2RX2Q9UBL9 471 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 GDF2Q9UK05 429 aaPredicted RBP14.25□□□□□ -0.13
SNX1-213ENST00000561026 B3GALT5Q9Y2C3 310 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 DSPPQ9NZW4 1301 aa14.25□□□□□ -0.13
SNX1-213ENST00000561026 ABCA1O95477 2261 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 E7EQL1 145 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 TFPTP0C1Z6 253 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 GKN3PP0CG01 181 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 ZCCHC18P0CG32 403 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 ETFAP13804 333 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 TTKP33981 857 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 ACAA2P42765 397 aaKnown RBP14.24□□□□□ -0.13
SNX1-213ENST00000561026 CRATP43155 626 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 VRK2Q86Y07 508 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 WDR31Q8NA23 367 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 SLC38A5Q8WUX1 472 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 DHRS9Q9BPW9 319 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 AMBRA1Q9C0C7 1298 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 MANSC1Q9H8J5 431 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 TPT1P8Q9HAU6 139 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 CALML5Q9NZT1 146 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 UPB1Q9UBR1 384 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 DCTN4Q9UJW0 460 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 POU2F3Q9UKI9 436 aa14.24□□□□□ -0.13
SNX1-213ENST00000561026 LIPT2A6NK58 231 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 CRLF1O75462 422 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ANP32DO95626 131 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 GPIP06744 558 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 CXCR1P25024 350 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 CRISP3P54108 245 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 TGFBR3Q03167 851 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 DMTNQ08495 405 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 SPOCK1Q08629 439 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 CEACAM7Q14002 265 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 NRF1Q16656 503 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 SLC9B1Q4ZJI4 515 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 LIN52Q52LA3 116 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 OTUD3Q5T2D3 398 aaPredicted RBP14.23□□□□□ -0.13
SNX1-213ENST00000561026 TSPO2Q5TGU0 170 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 C9orf135Q5VTT2 229 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ZNF836Q6ZNA1 936 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 MAVSQ7Z434 540 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 C17orf78Q8N4C9 275 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 TMEM99Q8N816 258 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ZIC4Q8N9L1 334 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
SNX1-213ENST00000561026 TMEM45BQ96B21 275 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 SF3B5Q9BWJ5 86 aaKnown RBP14.23□□□□□ -0.13
SNX1-213ENST00000561026 C1QTNF6Q9BXI9 259 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 RMND5AQ9H871 391 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ZIM2Q9NZV7 527 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 ATRQ13535 2644 aa14.23□□□□□ -0.13
SNX1-213ENST00000561026 M0R1B8 84 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 AKR7A3O95154 331 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 BCHEP06276 602 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 DSTNP60981 165 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 MAGOHP61326 146 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 COPZ1P61923 177 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 OR7A5Q15622 319 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 ZSWIM7Q19AV6 140 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 C1QTNF12Q5T7M4 302 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 RNF220Q5VTB9 566 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 WBP2NLQ6ICG8 309 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 C11orf71Q6IPW1 123 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 MSANTD1Q6ZTZ1 278 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 MUC15Q8N387 334 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 CLIP4Q8N3C7 705 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 CADM2Q8N3J6 435 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 OR9K2Q8NGE7 335 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 ITCHQ96J02 903 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 ADAD1Q96M93 576 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 OR52B2Q96RD2 323 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 MDFIQ99750 246 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms