RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 LRTOMTQ8WZ04 291 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PNPLA2Q96AD5 504 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZBTB8AQ96BR9 441 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 DTNBP1Q96EV8 351 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SLC41A3Q96GZ6 507 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 HS6ST2Q96MM7 605 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TAAR6Q96RI8 345 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PKP2Q99959 881 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 BDH2Q9BUT1 245 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 POTEKPQ9BYX7 375 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TTTY12Q9BZ98 90 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SLC19A3Q9BZV2 496 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 GABARAPL1Q9H0R8 117 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PTGES2Q9H7Z7 377 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TMEM27Q9HBJ8 222 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TAS2R10Q9NYW0 307 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 MED11Q9P086 117 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 AURKCQ9UQB9 309 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TP53TG5Q9Y2B4 290 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 FAM32AQ9Y421 112 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 KMT2BQ9UMN6 2715 aaPredicted RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 NBASA2RRP1 2371 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TNRC6AQ8NDV7 1962 aaKnown RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 COL6A6A6NMZ7 2263 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 A0A087WUU8 490 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TMED7-TICAM2A0A0A6YYA0 188 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TRBV4-1A0A0J9YWV2 114 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 OR2M5A3KFT3 312 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 G3V3Y1 287 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 hCG_2039718K7EN88 272 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 HCN1O60741 890 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TIPRLO75663 272 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 DIRAS1O95057 198 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ATP6V1G2O95670 118 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 F10P00742 488 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 CST1P01037 141 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MT-ND1P03886 318 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 FAM87AP0C7U9 286 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 GP1BBP13224 206 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 UQCRBP14927 111 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF26P17031 533 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 CBLP22681 906 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TACR3P29371 465 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 RRM2P31350 389 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 DNAJA1P31689 397 aaKnown RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 RYKP34925 604 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MEOX1P50221 254 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ERFP50548 548 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 POLR2HP52434 150 aaKnown RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 GPR85P60893 370 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 COPZ1P61923 177 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SLC34A1Q06495 639 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 FHL1Q13642 323 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 RCN1Q15293 331 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SEC23BQ15437 767 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MICAQ29983 383 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 CMPK2Q5EBM0 449 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ALG10BQ5I7T1 473 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SLC6A19Q695T7 634 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 C1orf94Q6P1W5 598 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 FAHD1Q6P587 224 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 PODNL1Q6PEZ8 512 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 C5orf46Q6UWT4 87 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 NHLRC1Q6VVB1 395 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TMPRSS11FQ6ZWK6 438 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MBOAT2Q6ZWT7 520 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ZER1Q7Z7L7 766 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TMEM179BQ7Z7N9 219 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SLC22A16Q86VW1 577 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 HIPK1Q86Z02 1210 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 EPHX4Q8IUS5 362 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 NKAIN4Q8IVV8 208 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 CHERPQ8IWX8 916 aaKnown RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SVOPLQ8N434 492 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 FAM109AQ8N4B1 249 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 OR5K1Q8NHB7 308 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 VANGL1Q8TAA9 524 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 C9orf43Q8TAL5 461 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SLC25A43Q8WUT9 341 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 STMN2Q93045 179 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SH3YL1Q96HL8 342 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 ADGRG7Q96K78 797 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 NPAS1Q99742 590 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 FNDC11Q9BVV2 318 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 DGCR6LQ9BY27 220 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 SLC25A18Q9H1K4 315 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 PCNX3Q9H6A9 2034 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MEPEQ9NQ76 525 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 C8orf4Q9NR00 106 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 USE1Q9NZ43 259 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 NKX1-2Q9UD57 310 aaPredicted RBP4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TRAPPC4Q9Y296 219 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 TMED7Q9Y3B3 224 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 V9GYQ6 96 aa4.93□□□□□ -1.62
ZEB1-220ENST00000560909 MED12Q93074 2177 aa4.92□□□□□ -1.62
ZEB1-220ENST00000560909 LOC102725191A0A1B0GVB3 256 aa4.92□□□□□ -1.62
ZEB1-220ENST00000560909 CPSF4LA6NMK7 179 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms