RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ZNF836Q6ZNA1 936 aa9□□□□□ -0.97
LDLR-214ENST00000560628 P2RY8Q86VZ1 359 aa9□□□□□ -0.97
LDLR-214ENST00000560628 ZNF440Q8IYI8 595 aa9□□□□□ -0.97
LDLR-214ENST00000560628 PIAS4Q8N2W9 510 aaPredicted RBP9□□□□□ -0.97
LDLR-214ENST00000560628 MIER2Q8N344 545 aa9□□□□□ -0.97
LDLR-214ENST00000560628 TMEM99Q8N816 258 aa9□□□□□ -0.97
LDLR-214ENST00000560628 TLCD1Q96CP7 247 aa9□□□□□ -0.97
LDLR-214ENST00000560628 RMND5AQ9H871 391 aa9□□□□□ -0.97
LDLR-214ENST00000560628 SDR39U1Q9NRG7 319 aaPredicted RBP9□□□□□ -0.97
LDLR-214ENST00000560628 SLC7A10Q9NS82 523 aa9□□□□□ -0.97
LDLR-214ENST00000560628 ZIM2Q9NZV7 527 aa9□□□□□ -0.97
LDLR-214ENST00000560628 UPB1Q9UBR1 384 aa9□□□□□ -0.97
LDLR-214ENST00000560628 GDF2Q9UK05 429 aaPredicted RBP9□□□□□ -0.97
LDLR-214ENST00000560628 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
LDLR-214ENST00000560628 FLVCR1Q9Y5Y0 555 aa9□□□□□ -0.97
LDLR-214ENST00000560628 SLC25A15Q9Y619 301 aa9□□□□□ -0.97
LDLR-214ENST00000560628 CDHR4A6H8M9 788 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 E7EQL1 145 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 M0R1B8 84 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 FAAHO00519 579 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 EIF1BO60739 113 aaKnown RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 ITGA5P08648 1049 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 NUDT7P0C024 238 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 ZCCHC18P0CG32 403 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 UQCRBP14927 111 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 CDH2P19022 906 aaPredicted RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 NCF2P19878 526 aaPredicted RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 IDUAP35475 653 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 CRISP3P54108 245 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 CDH11P55287 796 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 HOXC5Q00444 222 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 SLC17A1Q14916 467 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 LARS2Q15031 903 aaKnown RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 GABRA6Q16445 453 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 LIN52Q52LA3 116 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 OTUD3Q5T2D3 398 aaPredicted RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 TSPO2Q5TGU0 170 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 SLC2A7Q6PXP3 512 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 ZIC4Q8N9L1 334 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 WDR31Q8NA23 367 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 TMEM19Q96HH6 336 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 MUS81Q96NY9 551 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 TRAF4Q9BUZ4 470 aaPredicted RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 ALG2Q9H553 416 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 PARPBPQ9NWS1 579 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 ADPRHL2Q9NX46 363 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 TAS2R16Q9NYV7 291 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 CALML5Q9NZT1 146 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 POU2F3Q9UKI9 436 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 ZNF443Q9Y2A4 671 aaPredicted RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 CHST2Q9Y4C5 530 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 PCDHB14Q9Y5E9 798 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 USH1CQ9Y6N9 552 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 FN1P02751 2386 aaKnown RBP8.99□□□□□ -0.97
LDLR-214ENST00000560628 ALPK2Q86TB3 2170 aa8.99□□□□□ -0.97
LDLR-214ENST00000560628 A0A0G2JPF8 293 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 FAM234BA2RU67 622 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 LIPT2A6NK58 231 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 HNRNPCL2B2RXH8 293 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 HNRNPCL3B7ZW38 293 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 CLIC1O00299 241 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 FRS3O43559 492 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 HNRNPCL1O60812 293 aaKnown RBP8.98□□□□□ -0.97
LDLR-214ENST00000560628 ERLIN1O75477 346 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 IGHV4-39P01824 125 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 GPIP06744 558 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 HNRNPCL4P0DMR1 293 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 CD40P25942 277 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 MAP2K6P52564 334 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 COPZ1P61923 177 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 PPP2R2BQ00005 443 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 SPOCK1Q08629 439 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 TMEM225Q6GV28 225 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 WBP2NLQ6ICG8 309 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 OR7E24Q6IFN5 339 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 PAQR6Q6TCH4 344 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 KLHL17Q6TDP4 642 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 EPGNQ6UW88 154 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 TMEM108Q6UXF1 575 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 AAED1Q7RTV5 226 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 SERPINA11Q86U17 422 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 GPAT4Q86UL3 456 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 PRIMA1Q86XR5 153 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 OR9K2Q8NGE7 335 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 GTF2H4Q92759 462 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 MAL2Q969L2 176 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 ZNF385AQ96PM9 386 aaKnown RBP8.98□□□□□ -0.97
LDLR-214ENST00000560628 SPATA9Q9BWV2 254 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 REG4Q9BYZ8 158 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 PAIP1Q9H074 479 aaKnown RBP8.98□□□□□ -0.97
LDLR-214ENST00000560628 SLCO5A1Q9H2Y9 848 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 CACYBPQ9HB71 228 aaKnown RBP8.98□□□□□ -0.97
LDLR-214ENST00000560628 MALT1Q9UDY8 824 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 B3GALT5Q9Y2C3 310 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 SLC9A8Q9Y2E8 581 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 DSPPQ9NZW4 1301 aa8.98□□□□□ -0.97
LDLR-214ENST00000560628 TMEM247A6NEH6 219 aa8.97□□□□□ -0.97
LDLR-214ENST00000560628 A8MVM7 634 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms