RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NDNFQ8TB73 568 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 YIPF6Q96EC8 236 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 CDC6Q99741 560 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 TAS2R10Q9NYW0 307 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 PTTG2Q9NZH5 202 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 CNOT2Q9NZN8 540 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 H2AFY2Q9P0M6 372 aaPredicted RBP9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 FBXL2Q9UKC9 423 aa9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF346Q9UL40 294 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 FARSAQ9Y285 508 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM72A0PK05 275 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 KDM4EB2RXH2 506 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 C11orf98E9PRG8 122 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 NOL3O60936 208 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 OR7A10O76100 309 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 DLGAP3O95886 979 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 PLGP00747 810 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 PNMTP11086 282 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 GP1BBP13224 206 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 PTGDSP41222 190 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 IL10RAQ13651 578 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TUBA3CQ13748 450 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 IRF3Q14653 427 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TSTQ16762 297 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 MEDAGQ5VYS4 303 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 PPP1R32Q7Z5V6 425 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ADGRG3Q86Y34 549 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 CYP4Z2PQ8N1L4 340 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 KDM8Q8N371 416 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNRF4Q8WWF5 429 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 LIN37Q96GY3 246 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 NMNAT3Q96T66 252 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 DOK1Q99704 481 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 KATNB1Q9BVA0 655 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TEX12Q9BXU0 123 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF700Q9H0M5 742 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 OR51E2Q9H255 320 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM185BQ9H7F4 350 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 EVA1AQ9H8M9 152 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 MMP25Q9NPA2 562 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 SPTBN2O15020 2390 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TMED7-TICAM2A0A0A6YYA0 188 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 LOC100506127A0A0U1RQW1 187 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 H3BML4 177 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 H7C1C5 153 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 SUSD5O60279 629 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 EIF4E2O60573 245 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 NDUFB2O95178 105 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 GADD45AP24522 165 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 DLSTP36957 453 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 HCCSP53701 268 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 LCN6P62502 163 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ITGADQ13349 1161 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 EFR3AQ14156 821 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 LYPD4Q6UWN0 246 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 P2RY8Q86VZ1 359 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ZFP41Q8N8Y5 198 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 FAM98AQ8NCA5 519 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 OR8K3Q8NH51 312 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF420Q8TAQ5 688 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 SPACA9Q96E40 222 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 MGLLQ99685 303 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 CDCA4Q9BXL8 241 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ERGIC3Q9Y282 383 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 TMED7Q9Y3B3 224 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 ZNF337Q9Y3M9 751 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 DOCK10Q96BY6 2186 aa9.87□□□□□ -0.83
SNRPA1-211ENST00000560433 CCDC187A0A096LP49 1063 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 LOC101059948A0A1B0GTJ6 334 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 PRR23D1E9PI22 279 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC25A12O75746 678 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 RAB36O95755 333 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 HMGN1P05114 100 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 PRR23D2P0DMB1 279 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 PEPDP12955 493 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 AHCYP23526 432 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC6A6P31641 620 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 CASP3P42574 277 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC6A8P48029 635 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 TMBIM6P55061 237 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 C17orf67Q0P5P2 114 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 C19orf57Q0VDD7 668 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 NFATC3Q12968 1075 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 LSAMPQ13449 338 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 TGIF1Q15583 401 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC25A30Q5SVS4 291 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 TMEM164Q5U3C3 297 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 NXNL2Q5VZ03 156 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 OTPQ5XKR4 325 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 NDUFAF7Q7L592 441 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 MDGA2Q7Z553 956 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 ANKRD13BQ86YJ7 626 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 ERI1Q8IV48 349 aaKnown RBP9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 SLC22A8Q8TCC7 542 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 RAB2BQ8WUD1 216 aa9.86□□□□□ -0.83
SNRPA1-211ENST00000560433 ARL5BQ96KC2 179 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms