RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FHL1Q13642 323 aa11□□□□□ -0.65
HERC1-205ENST00000559886 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
HERC1-205ENST00000559886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11□□□□□ -0.65
HERC1-205ENST00000559886 ZNF691Q5VV52 312 aa11□□□□□ -0.65
HERC1-205ENST00000559886 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
HERC1-205ENST00000559886 LRRC17Q8N6Y2 441 aa11□□□□□ -0.65
HERC1-205ENST00000559886 ZFP62Q8NB50 900 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 FAM83FQ8NEG4 500 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 SNRNP27Q8WVK2 155 aaKnown RBP11□□□□□ -0.65
HERC1-205ENST00000559886 TM9SF4Q92544 642 aa11□□□□□ -0.65
HERC1-205ENST00000559886 OSTF1Q92882 214 aa11□□□□□ -0.65
HERC1-205ENST00000559886 DDIT4LQ96D03 193 aa11□□□□□ -0.65
HERC1-205ENST00000559886 UBL7Q96S82 380 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 TTTY12Q9BZ98 90 aa11□□□□□ -0.65
HERC1-205ENST00000559886 PLA2G12AQ9BZM1 189 aa11□□□□□ -0.65
HERC1-205ENST00000559886 OR2B2Q9GZK3 357 aa11□□□□□ -0.65
HERC1-205ENST00000559886 ZNF703Q9H7S9 590 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 UBAP1Q9NZ09 502 aa11□□□□□ -0.65
HERC1-205ENST00000559886 B4GALT7Q9UBV7 327 aa11□□□□□ -0.65
HERC1-205ENST00000559886 ZNF337Q9Y3M9 751 aa11□□□□□ -0.65
HERC1-205ENST00000559886 SPIN1Q9Y657 262 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 CACNA1GO43497 2377 aa11□□□□□ -0.65
HERC1-205ENST00000559886 TRAV17A0A0B4J275 112 aa11□□□□□ -0.65
HERC1-205ENST00000559886 OR2M5A3KFT3 312 aa11□□□□□ -0.65
HERC1-205ENST00000559886 BGLAPP02818 100 aa11□□□□□ -0.65
HERC1-205ENST00000559886 GGT2P36268 569 aa11□□□□□ -0.65
HERC1-205ENST00000559886 GIPRP48546 466 aa11□□□□□ -0.65
HERC1-205ENST00000559886 CD97P48960 835 aa11□□□□□ -0.65
HERC1-205ENST00000559886 B3GALT5-AS1P59052 145 aa11□□□□□ -0.65
HERC1-205ENST00000559886 TOMM20Q15388 145 aa11□□□□□ -0.65
HERC1-205ENST00000559886 ZBED5Q49AG3 693 aa11□□□□□ -0.65
HERC1-205ENST00000559886 FAM69AQ5T7M9 428 aa11□□□□□ -0.65
HERC1-205ENST00000559886 RAET1LQ5VY80 246 aa11□□□□□ -0.65
HERC1-205ENST00000559886 TMEM236Q5W0B7 351 aa11□□□□□ -0.65
HERC1-205ENST00000559886 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
HERC1-205ENST00000559886 OR8D4Q8NGM9 314 aa11□□□□□ -0.65
HERC1-205ENST00000559886 OR6S1Q8NH40 331 aa11□□□□□ -0.65
HERC1-205ENST00000559886 TEX47Q8TBZ9 253 aa11□□□□□ -0.65
HERC1-205ENST00000559886 SLC25A43Q8WUT9 341 aaPredicted RBP11□□□□□ -0.65
HERC1-205ENST00000559886 ZNF570Q96NI8 536 aa11□□□□□ -0.65
HERC1-205ENST00000559886 PIGQQ9BRB3 760 aa11□□□□□ -0.65
HERC1-205ENST00000559886 POTEKPQ9BYX7 375 aa11□□□□□ -0.65
HERC1-205ENST00000559886 FKRPQ9H9S5 495 aa11□□□□□ -0.65
HERC1-205ENST00000559886 NANSQ9NR45 359 aa11□□□□□ -0.65
HERC1-205ENST00000559886 TRAV27A0A087WT01 109 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 MED19A0JLT2 244 aaPredicted RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 OR2T1O43869 369 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 HCN1O60741 890 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 RCBTB2O95199 551 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 AHSA1O95433 338 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 MT-ATP6P00846 226 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 ASAH2BP0C7U1 165 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 RFC3P40938 356 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 CLK1P49759 484 aaKnown RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 CDK5Q00535 292 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 PDK3Q15120 406 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 TBR1Q16650 682 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 SYT14P1Q58G82 188 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 YRDCQ86U90 279 aaKnown RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 CCDC71Q8IV32 467 aaPredicted RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 ZADH2Q8N4Q0 377 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 C10orf53Q8N6V4 93 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 OR51A7Q8NH64 312 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 OR14L1PQ8NHC6 308 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 ARL5BQ96KC2 179 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 TNFRSF13CQ96RJ3 184 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 ZNF229Q9UJW7 825 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 PCDHGB7Q9Y5F8 929 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 PCDHGB5Q9Y5G0 923 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 CHD8Q9HCK8 2581 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 TRAPPC6AO75865 159 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 HPNP05981 417 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 RPS4XP62701 263 aaKnown RBP10.99□□□□□ -0.65
HERC1-205ENST00000559886 GINS1Q14691 196 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 SMARCD3Q6STE5 483 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 TMEM251Q8N6I4 163 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 ATP6V1C2Q8NEY4 427 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 SAMD8Q96LT4 415 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 APOL4Q9BPW4 351 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 ENKD1Q9H0I2 346 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 MCCC2Q9HCC0 563 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 HSPE1-MOB4S4R3N1 261 aa10.99□□□□□ -0.65
HERC1-205ENST00000559886 FTCDNL1E5RQL4 147 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 H3BML4 177 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 TSPAN19P0C672 248 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 TFPIP10646 304 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 PEPDP12955 493 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ISL1P61371 349 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 PLGLB1Q02325 96 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ANKDD1AQ495B1 522 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 SLC27A4Q6P1M0 643 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms